Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 288 1e-72 >seq4 Length=3023470 Score = 288 bits (318), Expect = 1e-72 Identities = 650/964 (67%), Gaps = 41/964 (4%) Strand=Plus/Minus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTC------ATAAC 92795 |||||||||| |||| | || ||| ||||| || | ||| | | || || || Sbjct 2626995 TTAGAAATCTTCATCAAATGCAAAATCATTGGCATCTTTATTTTCACTCTTGGCCATGAC 2626936 Query 92796 ACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGA 92855 |||| |||||||| || |||| |||||||||||||||| ||||| || |||| || Sbjct 2626935 ACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGA 2626876 Query 92856 TATCGAATTCACTAGTGATT-----GGATTCTTGGCGTTATAATACTTTTC----ACCGA 92906 || |||| | | | | ||||| || | || ||| |||||| ||| Sbjct 2626875 GAT---ATTCTCCATAAAATCAAATGGATTGGTGACATTGTAA-ACTTTTTTGTTACC-- 2626822 Query 92907 TCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAAT 92966 ||| | ||||||||| || || |||||||| | || ||| ||||||| | ||||| Sbjct 2626821 -CAAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAAT 2626763 Query 92967 TCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026 ||||||| | | || || || | || || || ||||| ||||| || ||| |||| | Sbjct 2626762 TCATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTG 2626703 Query 93027 CTTCTTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTA 93084 |||| | || | |||| | | || || ||| ||| | ||| | || | | Sbjct 2626702 CTTCAGT-AATAATTCTTTCAACAATCT-TTGGGTCAGGTCTATGTTGTAAATGAGCAAA 2626645 Query 93085 CATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAA 93144 || ||||| ||||| || || ||||||||||| || || | ||||| |||||| || Sbjct 2626644 CAACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAA 2626585 Query 93145 TGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGa 93204 || || ||||| | | ||||| ||||| | ||| || || |||||||| ||| Sbjct 2626584 GGTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACT 2626525 Query 93205 aaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG---CGGA 93261 ||||| ||||| || || || ||||| || || | | || ||||| || |||| Sbjct 2626524 GAAAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGA 2626465 Query 93262 ATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 || || || |||||| | | |||||||| || || || ||||| ||| | |||| Sbjct 2626464 AT--CT--TGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTT 2626409 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 | ||||| || |||| | |||| || | | ||| || || || || || || | Sbjct 2626408 CAATAGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATA 2626349 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 ||||| |||| ||||| | || ||||| |||||||| || || || || | | Sbjct 2626348 ATGAATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGG 2626289 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 |||| | || || ||||| |||||| | || || | |||||||| || ||||||| Sbjct 2626288 CTTCAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCAT 2626229 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTT--TATAAAATGTTTCTCATCATCTTTAAG 93558 | || || || ||||| |||| | || ||| || ||| | |||| || || | Sbjct 2626228 CAGAGGCAGCGAAAAAGGCCA--AGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAA 2626171 Query 93559 CTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 || || |||||| |||||||| | ||| | |||||| ||||||| || || Sbjct 2626170 TTTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGA 2626111 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 |||||| || || |||||||| | ||| || || || ||| ||| ||||| |||||| | Sbjct 2626110 TGCTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATA 2626051 Query 93676 ACGA 93679 |||| Sbjct 2626050 ACGA 2626047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860737353160