Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 2e-31
seq3 132 4e-26
seq4 87.8 2e-12
>seq5
Length=2091826
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || || ||||| || |||| | || || ||| | |
Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
||||||||||||||||| |||| || || ||| ||||| | || ||||||
Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGGTTTT 2075444
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || |||||||| || |||| | || || ||| | |
Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| | || || || ||| ||||| | || |||
Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075675
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || |||||||| || |||| | || || || | |
Sbjct 2076130 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATCA 2076071
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || || |||||||| || ||||||||||| ||||||
Sbjct 2076070 GACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2076011
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| || || ||| | || | ||||| ||||||
Sbjct 2076010 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075951
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| | || || || ||| ||||| | || |||
Sbjct 2075950 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGT 2075903
>seq3
Length=962442
Score = 132 bits (146), Expect = 4e-26
Identities = 171/235 (73%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGA-TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271
||||||| ||||||| ||||| ||||| | || |||||||| ||||| | ||||| ||
Sbjct 22334 GTAAAGAATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGA 22393
Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
| | || ||| | ||| || |||| || || ||||||||||| || || |||||
Sbjct 22394 GTCATCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACC 22453
Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391
||||||||| | | || ||||| || ||||| || || ||| | || | |||||
Sbjct 22454 AGATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGA 22513
Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 22514 CTACAACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 22568
>seq4
Length=3023470
Score = 87.8 bits (96), Expect = 2e-12
Identities = 162/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 129117 CAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTT 129176
||||||| || | | |||||| ||||| ||||| || | | | |||||| ||
Sbjct 2500675 CAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGA 2500734
Query 129177 GGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236
||| | ||||| || |||||||||| || || ||||| | || | || || |||||
Sbjct 2500735 AGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCAT 2500794
Query 129237 GTAAGCCACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGT 129296
|||||| | | ||||||| || |||||| | || | || ||| ||||
Sbjct 2500795 TGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATC 2500854
Query 129297 CCAGTCCCACA-TCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACC 129350
||| ||||||| | | ||| | | || |||||||||||||||||||| | |||
Sbjct 2500855 CCAATCCCACAATTCAGTTGGCTTTCTG-TTCCACAAGTCGTATTGCAACAAACC 2500908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727953961085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |