Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 3e-38
seq5 168 1e-36
>seq3
Length=962442
Score = 174 bits (192), Expect = 3e-38
Identities = 167/214 (78%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || || ||||||||||| || ||||| | || || |||||
Sbjct 22553 CAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 22494
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || ||||| || |||||||||||
Sbjct 22493 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTC 22434
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||| || ||||| || ||||||||
Sbjct 22433 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGT 22374
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| ||||| ||||| ||||| || || ||||||
Sbjct 22373 TTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340
>seq5
Length=2091826
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| ||||| |||||||| ||||| || ||||| | || || |||||
Sbjct 2075462 CAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075521
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || |||||||| ||||| |||||
Sbjct 2075522 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075581
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||||| || || ||||||| |||||| || || |||||||||||
Sbjct 2075582 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075641
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || |||||||| || |||||
Sbjct 2075642 CTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Score = 167 bits (184), Expect = 4e-36
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| |||||||| ||||| || ||||| | || || |||||
Sbjct 2075918 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075977
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || |||||||| ||||| |||||
Sbjct 2075978 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2076037
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||||| ||| || || || |||||||||||
Sbjct 2076038 TTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGT 2076097
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || | || |||||||| || |||||| ||
Sbjct 2076098 CTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTG 2076134
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| |||||||| ||||| || ||||| | || || |||||
Sbjct 2075690 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075749
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || |||||||| ||||| |||||
Sbjct 2075750 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075809
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||||| || || ||||||| |||||| || || |||||||||||
Sbjct 2075810 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075869
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || |||||||| || |||||
Sbjct 2075870 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622296317480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |