Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 174 3e-38 seq5 168 1e-36 >seq3 Length=962442 Score = 174 bits (192), Expect = 3e-38 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || || ||||||||||| || ||||| | || || ||||| Sbjct 22553 CAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 22494 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || ||||| || ||||||||||| Sbjct 22493 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTC 22434 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||| || ||||| || |||||||| Sbjct 22433 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGT 22374 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| ||||| ||||| ||||| || || |||||| Sbjct 22373 TTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340 >seq5 Length=2091826 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||||| ||||| |||||||| ||||| || ||||| | || || ||||| Sbjct 2075462 CAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075521 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || |||||||| ||||| ||||| Sbjct 2075522 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075581 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||| || || ||||||| |||||| || || ||||||||||| Sbjct 2075582 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075641 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || |||||||| || ||||| Sbjct 2075642 CTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674 Score = 167 bits (184), Expect = 4e-36 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| |||||||| ||||| || ||||| | || || ||||| Sbjct 2075918 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075977 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || |||||||| ||||| ||||| Sbjct 2075978 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2076037 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || || ||||||| ||| || || || ||||||||||| Sbjct 2076038 TTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGT 2076097 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | || |||||||| || |||||| || Sbjct 2076098 CTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTG 2076134 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| |||||||| ||||| || ||||| | || || ||||| Sbjct 2075690 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 2075749 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || |||||||| ||||| ||||| Sbjct 2075750 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 2075809 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||| || || ||||||| |||||| || || ||||||||||| Sbjct 2075810 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 2075869 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || |||||||| || ||||| Sbjct 2075870 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622296317480