Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq4 109 5e-19
seq5 96.9 3e-15
>seq4
Length=3023470
Score = 109 bits (120), Expect = 5e-19
Identities = 171/245 (70%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 153999 AAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACA 154058
||||||| | ||||| | |||| | |||||| || || ||||| || | |
Sbjct 2500664 AAATCTTTCAACAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAG 2500723
Query 154059 TACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTT 154118
|| | ||| ||| | |||||||| |||| ||||| || || ||||| | |||||
Sbjct 2500724 TAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAA 2500783
Query 154119 GCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAAT 154178
|| || ||||| ||||||||||| ||||||| || ||||||||| |||| |
Sbjct 2500784 GCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCT 2500843
Query 154179 TTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAA 154238
|| || || |||||| |||||| | || || | |||||||| ||||||||||||
Sbjct 2500844 TTCAATTCATCCCAATCCCACAATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAAC 2500903
Query 154239 ACACC 154243
| |||
Sbjct 2500904 AAACC 2500908
>seq5
Length=2091826
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | ||| | || | || |||||||||||||||||||| || |
Sbjct 2075675 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075734
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || || || ||| |||| | | || || || || ||
Sbjct 2075735 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075794
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| |||||||| ||||| || || || ||| || | || || | || ||
Sbjct 2075795 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2075854
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || | |||||| |||||||| ||||| ||||||||||||||
Sbjct 2075855 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | ||| | || | || |||||||||||||||||||| || |
Sbjct 2075903 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075962
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || || || ||| |||| | | || || || || ||
Sbjct 2075963 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2076022
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| |||||||| ||||| || || || || || | || || | || ||
Sbjct 2076023 AATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAAC 2076082
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||| || | |||||| |||||||| ||||| |||||||||||||||
Sbjct 2076083 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | ||| | || | || |||||||||||||||||||| || |
Sbjct 2075447 ACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075506
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || || || ||| |||| | | || || || || ||
Sbjct 2075507 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075566
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| |||||||| ||||| || || || ||| || | || || | || ||
Sbjct 2075567 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2075626
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || | |||||| || ||||| ||||| ||||||||||||||
Sbjct 2075627 CTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644743789960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |