Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7 347 5e-90 seq1 302 2e-76 seq4 266 1e-65 seq5 147 9e-30 seq3 136 2e-26 >seq7 Length=2235583 Score = 347 bits (384), Expect = 5e-90 Identities = 1050/1594 (66%), Gaps = 36/1594 (2%) Strand=Plus/Plus Query 450920 GGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAGAA 450979 ||||||||| | |||||||| | || ||||| | | || ||| | | || ||| Sbjct 1481230 GGAATTGATTTAGGAACCACATACTCTTGTGTTGCTCACTATGCAAACGACAGAGTTGAA 1481289 Query 450980 ATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTACGGATTC 451038 ||||| || ||||||||||| | || ||||||| || || | || || || ||| | Sbjct 1481290 ATTATTGCTAATGACCAAGG-TAACAGAACTACACCATCTTTTGTTGCATTCACTGATAC 1481348 Query 451039 AGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAA--TGGTAAATTCAAA--TGCCAAAAA 451092 |||||| | | || | ||||| || ||||| || || |||| |||||| Sbjct 1481349 TGAAAGATTAATTGGTGATGCTGCCAAGAATCAAGCTGCTA---TCAACCCTGCCAA--- 1481402 Query 451093 CACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAA 451152 ||| || | |||||||||||||||||||| | | | |||||||| | || ||||| Sbjct 1481403 CACTGTTTTCGATGCTAAACGTTTAATTGGTAGAAAATTTGATGATGCTGAAGTCCAAAA 1481462 Query 451153 AGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGT 451212 || ||| |||| | | | || || | | || ||||| | |||||||| Sbjct 1481463 CGATCTTAAACACTTTCCATTCAAAGTTGTTGACAAGGGTGGTAAGCCAAACATTCAAGT 1481522 Query 451213 AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC 451272 | || ||||||||||| || ||| | || |||||||| ||||| ||||| | Sbjct 1481523 TGAATACAAAGGTGAAACCAAGGTTTTCACCCCAGAAGAAATCTCATCCATGGTATTGGG 1481582 Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332 ||| ||||| ||||| || ||| || | ||| | | |||| ||||| || |||| Sbjct 1481583 TAAGATGAAGGAAACTGCTGAAGGTTACTTGGGTGGTACTGTTAAAGATGCTGTTGTTAC 1481642 Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 |||||| ||||| || || ||| | ||| | ||||| || || ||||| || ||||| Sbjct 1481643 TGTTCCAGCTTACTTTAACGATTCTCAAAGACAAGCTACCAAGGATGCTGGTTTAATTGC 1481702 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 |||||| |||||| | ||||||| || ||||| || || ||||| | || ||||| | Sbjct 1481703 TGGTTTGAATGTTTTGAGAATTATCAACGAACCAACTGCTGCTGCCATTGCTTATGG-TT 1481761 Query 451453 AGGAAAATCAAAAG--AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 ||| || || | || || ||| | ||| | || | ||||| || ||||| || Sbjct 1481762 TGGACAA-GAAGGGCTCAAAAGGTGAACACAATGTCTTGATCTTTGACTTGGGTGGTGGT 1481820 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 ||| |||| ||| | | | ||||| || || | || ||||| || || || | Sbjct 1481821 ACTTTTGATGTTTCATTGTTGACCATTGATGAAGGTATTTTCGAAGTTAAAGCTACTGCT 1481880 Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAAAACT 451630 ||||||||||| | || ||||||||| | ||||| | | || | | || | Sbjct 1481881 GGTGATACTCACTTGGGTGGTGAAGATTTCGATAACAGATTGGTTAACTTTTTCATCCAA 1481940 Query 451631 GATGTTCAACGAAAACTAAAAGTA-GATATTTCTACTAACCAAAAAGCACTTAGACGTCT 451689 || ||||| ||| | ||| | ||||||||| |||||||| |||| | ||| | | Sbjct 1481941 GA-ATTCAAGAGAAAGAACAAGAAGGATATTTCTGGTAACCAAAGAGCATTGAGAAGATT 1481999 Query 451690 TAAAACATCAGCAGAAAAAGCTAAAATTAC--ACTCA-GTTCAACACAAACTACTAGTAT 451746 | ||| || |||| ||| || | || ||| || | ||||| || || Sbjct 1482000 AAGAACTGCATGTGAAAGAGCAAAGAGAACCTTGTCATCATCTGCTCAAAC--CT-CAAT 1482056 Query 451747 AAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTGCTAAATT 451806 | |||||| || ||| || || || | | ||| | | || | |||| ||| Sbjct 1482057 TGAAATTGATTCATTGTATGAAGGTATCGACTTTTACACTTCAATCACTAGAGCTAGATT 1482116 Query 451807 TGAATCAATTTGTTC-CAGTATTTTTGCACGGGTAATGAAACCTGTTGATCAAGTATTAC 451865 |||| | | ||| | | | || | | | || | || ||||| |||| || Sbjct 1482117 TGAAGAATTGTGTGCTGACTTATTCAGATCCACT-TTGGACCCAGTTGAAAAAGTTTTGA 1482175 Query 451866 ATGATTCTAAAATTAGTAAAGATA-AAATTGATGAAATTGTGCTTGTAGGAGGTTCTACA 451924 | ||| | || ||| | ||| | || |||| |||||||| ||||| || ||||| || Sbjct 1482176 AGGATGCCAAGATT-GACAAGTCACAAGTTGAAGAAATTGTCCTTGTTGGTGGTTCAACC 1482234 Query 451925 CGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAACTATGTAAG 451984 ||||||| ||| ||||| | || | || || || || ||| || | ||| Sbjct 1482235 AGAATTCCAAAAGTTCAAAAATTGGTTTCCGATTTCTTCAATGGTAAAGAATTGAACAAG 1482294 Query 451985 AGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACA 452044 | || || |||||||||||||| || |||||||| || ||||| || || | || Sbjct 1482295 TCTATCAACCCAGATGAAGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCCATCTTGACC 1482354 Query 452045 GGT-TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCT 452103 ||| || | || || | |||||| |||| | ||||| | || | || | Sbjct 1482355 GGTGACACTTCATCCAAGA-CCCAAGATATCTTGTTGTTGGATGTTGCTCCATTGTCATT 1482413 Query 452104 TGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCC 452163 || ||||||| |||||||| || ||||| || || ||| | || || |||| || Sbjct 1482414 AGGTATTGAAACTGCTGGTGGTATCATGACCAAATTGATTCCAAGAAATGCTACTATCCC 1482473 Query 452164 TTGTAAAAAGAGTCAAACATTTAGTACAGCAA--GTGATAACCAACCAGGTGTAACTATT 452221 || ||| |||| || | || | | |||||||||||||||||| ||| Sbjct 1482474 AACCAAGAAGTCCGAAACCTT--CTCCACCTATGCTGATAACCAACCAGGTGTCTTGATT 1482531 Query 452222 CAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACT 452281 |||||||||||||| ||| | || | ||| || || || | || |||| Sbjct 1482532 CAAGTGTTTGAAGGTGAAAGAGCCAAGACCAAGGACAACAACTTGTTGGGTAAATTCGAA 1482591 Query 452282 CTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTT 452341 | || ||||| || ||||| || ||| ||||||||| |||| | |||| | Sbjct 1482592 TTATCTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATTGAAGTTACTTTTGATATC 1482651 Query 452342 GATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAA 452401 ||||| |||||||| | ||||| ||| | ||||| | ||||| | |||| Sbjct 1482652 GATGCCAATGGTATCTTGAATGTTTCTGCTTTGGAAAAGGGTACCGGAAAGACTCAAAAG 1482711 Query 452402 ATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGAT 452461 ||||| || || || |||||| | ||||| ||||||||||||||||| ||||| | Sbjct 1482712 ATTACCATCACCAACGATAAAGGTAGATTATCCAAAGAAGATATTGAAAAGATGGTTAAC 1482771 Query 452462 GAAGCAGAAAAATTCAAGGATGATGATGAACAAG 452495 ||||| ||||| |||||||| || |||||| ||| Sbjct 1482772 GAAGCTGAAAAGTTCAAGGAAGAAGATGAAAAAG 1482805 >seq1 Length=957321 Score = 302 bits (334), Expect = 2e-76 Identities = 1045/1597 (65%), Gaps = 46/1597 (3%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||| | |||||||| | || ||||| | | || | ||||| | || | Sbjct 75355 TTGGTATTGATTTAGGAACCACATACTCTTGTGTGGCTCATTTCGCAAATGATAGAGTTG 75296 Query 450978 AAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||||| || ||||||||||| | || ||||||| || || | || || || ||| Sbjct 75295 AAATTATTGCTAATGACCAAGG-TAACAGAACTACACCATCTTTTGTTGCATTCACTGAT 75237 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAA--TGGTAAATTCAAA--TGCCAAA 451090 | ||||| | | || | || || || ||||| || || |||| |||||| Sbjct 75236 ACTGAAAGGTTAATTGGTGATGCAGCCAAGAATCAAGCTGCTA---TCAACCCTGCCAA- 75181 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||| || | |||||||||||||||||||| | | | ||||||| || ||| Sbjct 75180 --CACTGTTTTCGATGCTAAACGTTTAATTGGTAGAAAATTTGATGATCCAGAAGTTCAA 75123 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGA---AAGCCCTATATT 451207 || || | || ||| | | | ||| | | | || || || || | ||| Sbjct 75122 AATGATATCAAGCATTTTCCATTCAA---AGTTATTGACAAGGGTGGTAAACCAAACATT 75066 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || ||||||||||| || |||| | || |||||||| ||||| |||||| Sbjct 75065 CAAGTTGAATACAAAGGTGAAACCAAGGTTTTTACCCCAGAAGAAATCTCATCCATGGTT 75006 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | ||||||||| ||| || ||| | | ||| | | |||| ||||| || Sbjct 75005 TTGGTTAAAATGAAGGAAGTTGCTGAAGGTTTCTTGGGTGGTACTGTTAAAGATGCTGTT 74946 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 |||||||||| ||||| || || ||| | ||| | ||||| || || ||||| || Sbjct 74945 GTTACTGTTCCAGCTTACTTTAACGATTCTCAAAGACAAGCTACCAAGGATGCTGGTTTA 74886 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||||||||| |||||| | ||||||| || || || || || ||||| | || ||| Sbjct 74885 ATTGCTGGTTTGAATGTTTTGAGAATTATCAACGAGCCAACTGCTGCTGCCATTGCTTAT 74826 Query 451448 GGACTAGGAAAATCAAAAG--AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 || | ||| || || | || || ||| | ||| | || | ||||| || |||| Sbjct 74825 GG-TTTGGACAA-GAAGGGCTCAAAAGGTGAACACAATGTCTTGATCTTTGACTTGGGTG 74768 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | || ||| |||| ||| | | | ||||| || || | || ||||| || || | Sbjct 74767 GTGGTACTTTTGATGTTTCATTGTTGGCTATTGATGAAGGTATTTTCGAAGTTAAAGCTA 74708 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGA 451625 | |||||||||||| | || ||||||||| | ||||| | | || | | || | Sbjct 74707 CTGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGATAACAGATTGGTTAACTTTTTCA 74648 Query 451626 AAACTGATGTTCAA-CGAAA-ACTAA-AAGTAGATATTTCTACTAACCAAAAAGCACTTA 451682 || ||||| |||| || || ||| ||||||||| |||||||| |||| | | Sbjct 74647 TCCAAGA-ATTCAAGAGAAAGACCAAGAAG--GATATTTCTGGTAACCAAAGAGCATTGA 74591 Query 451683 GACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTAC--ACTCA-GTTCAACACAAACTA 451739 || | | | ||| | |||| ||| || | || ||| || | ||||| Sbjct 74590 GAAGATTGAGAACTGCTTGTGAAAGAGCAAAGAGAACCTTGTCATCATCTGCTCAAAC-- 74533 Query 451740 CTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTG 451799 || || | |||||| || ||| || || || | | ||| | | || | | Sbjct 74532 CT-CAATTGAAATTGATTCATTGTATGAAGGTATTGACTTTTACACTTCAATCACTAGAG 74474 Query 451800 CTAAATTTGAATCAATTTGTTC-CAGTATTTTTGCACGGGTAATGAAACCTGTTGATCAA 451858 ||| ||||||| | | ||| | | | || | | | || | || ||||| || Sbjct 74473 CTAGATTTGAAGAATTGTGTGCTGACTTATTCAGATCCACT-TTGGACCCAGTTGAAAAA 74415 Query 451859 GTATTACATGATTCTAAAATTAGTAAAGATA-AAATTGATGAAATTGTGCTTGTAGGAGG 451917 || || | ||| | || ||| | ||| | || |||| |||||||| ||||| || || Sbjct 74414 GTTTTGAAGGATGCCAAGATT-GACAAGTCACAAGTTGAAGAAATTGTCCTTGTTGGTGG 74356 Query 451918 TTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAACT 451977 ||| || ||||||| || |||||| | || | || || || || ||| || | Sbjct 74355 TTCAACCAGAATTCCAAAGATTCAAAAATTGGTTTCCGATTTCTTCAATGGTAAAGAATT 74296 Query 451978 ATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTAT 452037 ||| | || || |||||||||||||| ||||||||||| || ||||| || || Sbjct 74295 GAACAAGTCTATCAACCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTCCAAGCTGCCAT 74236 Query 452038 TCTAACAGGT-TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTC 452096 | || ||| || | | || | | ||||| |||| | ||||| | || Sbjct 74235 CTTGACCGGTGACACTTCGTCCAAGACCCAG-GATATCTTGTTGTTGGATGTTGCTCCAT 74177 Query 452097 TATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTT 452156 | || | || ||||||| |||||||| || ||||| || || ||| | || || Sbjct 74176 TGTCATTAGGTATTGAAACTGCTGGTGGTATCATGACCAAATTGATTCCAAGAAATGCTA 74117 Query 452157 CTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA--GTGATAACCAACCAGGTGT 452214 ||||||| || ||| |||| || | || | | |||||||||||||||||| Sbjct 74116 CTATTCCAACCAAGAAGTCCGAAACCTT--CTCCACCTATGCTGATAACCAACCAGGTGT 74059 Query 452215 AACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGA 452274 ||||||||||||||||| ||| | || | ||| || || || | || | Sbjct 74058 CTTGATTCAAGTGTTTGAAGGTGAAAGAGCCAAGACCAAGGACAACAACTTGTTGGGTAA 73999 Query 452275 ATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTA 452334 ||| | || ||||| || ||||| || ||| ||||| ||| |||| | Sbjct 73998 ATTCGAATTATCTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATCGAAGTTACTTT 73939 Query 452335 TGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATC 452394 |||| | ||||| |||||||| | ||||| ||| | ||||| | ||||| | Sbjct 73938 TGATATCGATGCCAATGGTATCTTGAATGTTTCTGCTTTGGAAAAGGGTACCGGAAAGAC 73879 Query 452395 AGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAAT 452454 |||| ||||| || || || |||||| | ||||| ||||||||||| || | ||| Sbjct 73878 TCAAAAGATTACCATCACCAACGATAAAGGTAGATTATCCAAAGAAGATATCGAGAGAAT 73819 Query 452455 GGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 ||| | ||||| ||||||| |||||| ||||| ||| Sbjct 73818 GGTTAACGAAGCTGAAAAATACAAGGAAGATGACGAA 73782 Score = 109 bits (120), Expect = 2e-18 Identities = 197/285 (69%), Gaps = 10/285 (4%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| ||||||| || || || || || ||| ||| | ||||| |||||| || | Sbjct 510230 GCAGTTGTTACTGTCCCGGCGTACTTTAACGATAGTCAAAGACAAGCTACTAAAAATTCT 510289 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | | | || || | || |||||| | |||||||| || ||||||||||| || Sbjct 510290 GGCAAAACAGTGGGGTTGGAAGTGCTTCGAGTCATTAATGAGCCAACAGCAGCTGCACTT 510349 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT-ATTTTAGTATTTGATTT 451500 ||||| ||| | ||||||| |||| || ||| || ||||||||||| Sbjct 510350 GCATACGGATGTGATAAATCAA-------GGAAGGAAGGAATCGTTGCTGTATTTGATTT 510402 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAGTAA 451559 |||||| ||||| ||||| || | ||| | || || ||||| || |||||||| Sbjct 510403 TGGTGGTGGAACCTTTGATATCTCAAT-CTTGGACATCGAGGATGGTGTTTTTGAAGTTC 510461 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 || || ||||| | || || | |||||||||||| | |||| Sbjct 510462 GAGCTACAAATGGAAACACCCACTTGGGAGGTGAAGATGTCGATA 510506 >seq4 Length=3023470 Score = 266 bits (294), Expect = 1e-65 Identities = 1019/1581 (64%), Gaps = 58/1581 (4%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 |||||||| ||| | || || || | |||||||| |||||| | |||||||| || Sbjct 2933763 ATTGGAATCGATTTGGGTACTACGTACTCATGTGTTGGTGTTATGAAGAATGGAAAAGTT 2933822 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||| |||| || || ||||| ||| ||||| || | || || | | | Sbjct 2933823 GAAATACTAGCCAACGATCAAGGTAATAGAATAACTCCATCGTATGTTGCATTCAATGGT 2933882 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAAA--TCAATGGTAAATTCAAATGCCAAAAACA 451094 |||||| | | || | || || ||| |||| | ||| |||| ||| |||| Sbjct 2933883 GATGAAAGATTGGTTGGTGACGCAGCCAAAAATCAA--GCTGCTTCCAATGTCAACAACA 2933940 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 |||| | |||| ||| | || |||||| | |||| ||||||| ||||| ||||| | Sbjct 2933941 CAGTGTTTGATATCAAAAGATTGATTGGCTTAAAGTATAATGATGACACTGTTCAAAAGG 2934000 Query 451155 A---GAAAAA-ATTCTTTTCTTATGATGTAGTAAATCAAAAAGG---AAAGCCC---TAT 451204 | ||| | || | | | | ||| | || || |||| | || || | | Sbjct 2934001 AATTGAAGCATATGCCATAC--AAGAT----TGAA--AACAAGGGCAACAGACCGGTTGT 2934052 Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTG-CTCCTGAAGAAATTTCATCTAT 451263 || || | || || || ||| | |||| | || | || ||||||||||| ||| Sbjct 2934053 ATCT--GTTGAATACAATGGCGAA-CAAAAAGTATTCACACCAGAAGAAATTTCGGGTAT 2934109 Query 451264 GGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGC 451323 | || | || ||||| || || || | || ||||| |||||| | || Sbjct 2934110 GATTTTGGGGAAGATGAAGTCAATCGCTGAGGAGTACCTTGGTAAGAAAGTTACCCACGC 2934169 Query 451324 AGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG 451383 || | |||||||| || || || |||||||| ||| | ||||||||||| ||||| || Sbjct 2934170 TGTTGTCACTGTTCCAGCCTACTTTAATGATGCCCAAAGACAAGCAACTAAGGATGCTGG 2934229 Query 451384 ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGC 451443 ||||||||||||||| ||| | ||||| |||||||||| ||||| || ||| | || Sbjct 2934230 TACTATTGCTGGTTTAAACGTTTTGAGAATTGTTAATGAACCAACAGCCGCCGCTATTGC 2934289 Query 451444 ATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGG 451503 |||||| | ||| ||| | ||| ||||| || | ||| | || | ||| || || Sbjct 2934290 CTATGGA-TTGGA----CAAGACCAAC-GAAGAGAAGCAAATTATCGTTTATGACTTGGG 2934343 Query 451504 TGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGC 451563 |||||| ||| |||| || | | || ||||||| ||| || || ||||| ||| Sbjct 2934344 TGGAGGTACTTTTGATGTCTCCTTGTTGTCGATTGAAGGTGGTGTTTTCGAAGTCTTGGC 2934403 Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTT 451623 || |||||| ||||| | || ||||| ||| |||| | ||||| || || Sbjct 2934404 TACTGCTGGTGACACTCACTTGGGTGGTGAGGATTTTGACCACAAGATTGTTAGATACTT 2934463 Query 451624 G--AAAACTGATGTTCAACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACTT 451681 | |||| | || || |||| || | ||| |||| | ||| ||| ||| || Sbjct 2934464 GGCCAAAC--AATTTAAAAAGAAACACAATATCGATGTTTCATCAAACGCAAAGGCAATT 2934521 Query 451682 AGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCAACACAAA---CT 451738 | | || | | ||| ||||| || || | ||| | ||| | |||| | Sbjct 2934522 TCAAAATTAAAGAGAGAAGCTGAAAAGGCCAAGAGAACATT---GTCATCTCAAATGTCA 2934578 Query 451739 ACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGT 451798 ||||| | | ||||| || |||||||| || |||| | | |||||| | | Sbjct 2934579 ACTAGAGTTGAAATTGACTCCTTTGTTGATGGTATTGATTTTTCAGAAACTCTTTCTAGA 2934638 Query 451799 GCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTAA-----TGAAACCTGTTG 451853 || ||||||||| | || | | || | || | || |||| || |||| Sbjct 2934639 GCCAAATTTGAA--GAATTAAACATGGCTTCATTCA---GAAAGACCTTGAAGCCAGTTG 2934693 Query 451854 ATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAG 451913 | ||||| || | ||| ||| ||| || | |||||||| ||||| | || | Sbjct 2934694 AACAAGTTTTGAAGGATGGTAATGTTAAAAAGTCCGATATTGATGATATTGTCTTGGTTG 2934753 Query 451914 GAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAAC 451973 | ||||| ||| ||||||| ||| ||||||| | ||| | |||| || ||| Sbjct 2934754 GTGGTTCCACAAGAATTCCAAAAGTTCAAGAATTATTGGAACAATTCTTTGATGGCAAAA 2934813 Query 451974 AACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAG 452033 | || || | | ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct 2934814 AGGCATCCAAAGGTATTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCAG 2934873 Query 452034 CTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACAC 452093 | | | | ||| ||| | || | | |||||| | || | ||||| | | Sbjct 2934874 GTGTCTTGAGTGGTGAAGAAGGTG------TCGATGATATTGTCTTGTTGGATGTCAATC 2934927 Query 452094 CTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAA 452153 | | || | || ||||||| | ||||| | ||||| | ||| |||| | || | Sbjct 2934928 CATTGACTTTGGGTATTGAAACTTCAGGTGGTGTTATGACCACTTTGATTAGAAGAAATA 2934987 Query 452154 CTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTG 452213 | ||||||| || ||| ||||| || || || ||||||||||||| || Sbjct 2934988 CCGCTATTCCAACCAAGAAGTCTCAAATTTTCTCCACTGCTGCTGATAACCAACCAACTG 2935047 Query 452214 TAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAG 452273 | |||||||| | ||||| ||| | ||||| | ||| || || | | | || Sbjct 2935048 TTTTAATTCAAGTTTACGAAGGTGAAAGAACAATGGCCAAAGACAACAACAGATTGGGTA 2935107 Query 452274 AATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCT 452333 |||| | | ||||| || ||||| || ||| ||||||||| | || | Sbjct 2935108 AATTCGAATTGACTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATTGAAGTCACAT 2935167 Query 452334 ATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAAT 452393 | | ||||| |||||||| | || || || | ||| || | |||| || | Sbjct 2935168 TCTCTTTGGATGCCAATGGTATCTTGAAAGTTGAAGCTGCTGATAAGGGAACTGGTAAGT 2935227 Query 452394 CAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAA 452453 | || | ||||| || || || || || | ||||| |||||||||||||| | || Sbjct 2935228 CTGAGAGTATTACCATCACCAACGAAAAGGGTAGATTATCAAAAGAAGATATTGATAGAA 2935287 Query 452454 TGGTAGATGAAGCAGAAAAAT 452474 |||| || |||||||| |||| Sbjct 2935288 TGGTTGAAGAAGCAGAGAAAT 2935308 Score = 170 bits (188), Expect = 8e-37 Identities = 739/1151 (64%), Gaps = 57/1151 (5%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || ||||| || ||| | || || || | |||||||| | | ||| | || | Sbjct 1179810 GCTATTGGTATCGATTTAGGTACTACTTACTCATGTGTCGCTACATACGACTCTGCA--- 1179754 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACT-ACTCCTTCATGGGTAAGTTTTAC 451032 || |||||||| || ||||| ||||| | || | | |||||||| | || |||||| Sbjct 1179753 GTTGAAATTATTGCCAATGAACAAGG-TAACAGAGTCACTCCTTCTTTTGTCGCTTTTAC 1179695 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 | ||||||| | | || | ||||| || ||||| | || || | ||| Sbjct 1179694 TAGTGAAGAAAGATTGATTGGTGATGCTGCCAAGAATCAA--GCTGCTTTGAACCCAAAA 1179637 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | ||||||||| ||||||||||| | | ||||||||| | || ||| Sbjct 1179636 AACACTGTTTTTGATGCTAAGCGTTTAATTGGTAGAGCTTTTGATGATGAATCCGTTCAA 1179577 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 || || | || | | | | | || | || || ||| | || | ||| | Sbjct 1179576 AAGGATATCAAGTCATGGCCATTCAAGGTTATTGATGTCAATGGACAACCACAAATTGAG 1179517 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || | || | |||||| || |||||| | || ||||||| || || |||||| | Sbjct 1179516 GTTGAATACTTGGATGAAACCAAGACTTTTTCCCCACAAGAAATCTCTTCAATGGTTTTG 1179457 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || || ||||| |||| || ||| | |||||| ||| | || || || Sbjct 1179456 ACCAAGATGAAGGAAATTGCTGAAGCTAAAATTGGTAAAAAGGTTGAAAAAGCCGTTATC 1179397 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| || ||||| || ||||| || ||| | ||||| || || ||||| || ||| Sbjct 1179396 ACTGTCCCAGCTTACTTTAATGACGCTCAAAGACAAGCTACCAAGGATGCTGGTGCCATT 1179337 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||||| || ||| | ||||||| |||||||| || || ||||| | || ||||| Sbjct 1179336 GCTGGTTTGAACGTTTTGAGAATTATCAATGAACCAACTGCTGCTGCCATTGCCTATGGT 1179277 Query 451451 CTAGGA------AAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 | || ||||| |||| | |||| | || |||| | || ||||| ||| Sbjct 1179276 TTGGGTGCTGGTAAATCC---GAAA---AGGAAAGACATGTTTTGATTTTCGATTTGGGT 1179223 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| ||| | | ||| | ||| || || || || || Sbjct 1179222 GGTGGTACTTTTGATGTTTCCTTGTTGAACATTACTGGTGGTGTTTTCACCGTTAAAGCC 1179163 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAA-TTGT-GGAATGGT 451622 || |||||||||||| | || ||| ||||| | || | ||| |||| |||| | Sbjct 1179162 ACTGCTGGTGATACTCACTTGGGTGGTCAAGATTTCGACAC--CAACTTGTTGGAACACT 1179105 Query 451623 TGAAAACTGATGTTCAACGAAAA-CTAA-AAGTAGATATTTCTACTAACCAAAAAGCACT 451680 | || | ||| || | |||| || ||| || ||||| | || | ||| | Sbjct 1179104 TCAAGAATGAATTTAAGAAAAAATCTGGTAAG--GACATTTCCGGTGACGCTAGAGCTTT 1179047 Query 451681 TAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCA---ACACAAAC 451737 ||| | | | ||| | |||| ||| || | || | ||| || ||||| Sbjct 1179046 AAGAAGATTGAGAACTGCTTGTGAAAGAGCAAAGAGATCATTGTCTTCTGGTACTCAAAC 1178987 Query 451738 TACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCG 451797 ||| || ||| |||| ||| ||||||| |||| | | | | | ||| | Sbjct 1178986 AACT-GTTGAAA--TTGACTCTTTGTTTGATGGTGAAGATTTCTCCGCCAATATCACCAG 1178930 Query 451798 TGCTAAATTTGAA----TCAAT------TTGTTCCAGTATTTTTGCACGGGTAATGAAAC 451847 |||| ||| ||| ||||| |||||| ||| | || || ||| Sbjct 1178929 AGCTAGATTCGAAGATATCAATGCTGCTTTGTTCAAGTCTACTT----------TGGAAC 1178880 Query 451848 CTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGC 451907 | ||||| ||||| || | ||| | || ||| || | || |||||||| |||| | Sbjct 1178879 CAGTTGAACAAGTTTTGAAGGATGCCAAGGTTAACAAGTCTCAAGTTGATGAAGTTGTCC 1178820 Query 451908 TTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAG 451967 |||| || ||||| || ||||||| ||| ||||| | |||||||| | |||| | Sbjct 1178819 TTGTTGGTGGTTCAACCAGAATTCCAAAAGTTCAAAAATTGTTGTCTGACTTCTTTGATG 1178760 Query 451968 GAAAACAACTATGTAAGAGCG-TAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 | |||||| | | || | | | || ||||||||||||||||| ||||||||||| ||| Sbjct 1178759 GTAAACAATTG-GAAAAATCAATCAACCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTT 1178701 Query 452027 CAAGCAGCTAT 452037 |||| ||||| Sbjct 1178700 CAAGGTGCTAT 1178690 Score = 91.5 bits (100), Expect = 6e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 560252 GAAGGTGATATGGGTAAAATTTATGGTTTTAACTGGAGACATTTTGGTGCTGATTATATT 560311 ||||||||| |||| | ||||||| ||| | ||||| |||||||||||||| |||| Sbjct 1390946 GAAGGTGATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATATAAA 1390887 Query 560312 AATTGTAACACCAATTATACAGGAAAAGGATTTGATCAACTTGTTA-AAATTATTGAGGA 560370 |||| | || | ||||| || |||| ||||||| | ||| | | | ||| || | Sbjct 1390886 GATTGCGATACTGACTATACTGGCCAAGGTTTTGATC-AGTTGCAAGATGTAATTAAGAA 1390828 Query 560371 AATAAAAACCAATCCTTCTAGTAGAAGAATTTTAATGTCAGATT 560414 ||||||| ||||| | | ||||||||| | ||||||| || Sbjct 1390827 GTTAAAAACTAATCCATATGATAGAAGAATCATCATGTCAGCTT 1390784 >seq5 Length=2091826 Score = 147 bits (162), Expect = 9e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| |||||| |||||||||| || || || | || ||||||||||| Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| || || ||||| || ||||| ||||| || |||||| Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || ||||| | || |||||| | |||||||| ||||||||| | || || || Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | ||| | ||||| || || ||| ||||||| Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGG 2075451 Score = 143 bits (158), Expect = 1e-28 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| |||||| |||| ||||| || || || | || ||||||||||| Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| || || ||||| || ||||| ||||| || |||||| Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || ||||| | || |||||| | |||||||| ||||||||| | || || || Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | ||| | ||||| || || ||| ||||||| Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGG 2075679 >seq3 Length=962442 Score = 136 bits (150), Expect = 2e-26 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || |||||||| || ||| | || ||||| ||||| Sbjct 22340 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 22399 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | | || || || ||||| ||||||||||| || || ||||| Sbjct 22400 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 22459 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||| | || || || | || |||||| | |||||||| ||||||||| | || || || Sbjct 22460 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 22519 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||| || || ||| ||||||| Sbjct 22520 CATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGG 22564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718172174972