Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq4 259 6e-64
seq3 87.8 2e-12
>seq4
Length=3023470
Score = 259 bits (286), Expect = 6e-64
Identities = 859/1319 (65%), Gaps = 33/1319 (3%)
Strand=Plus/Minus
Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788
||||| || ||||| |||| ||| |||||||| ||||||| | |||||| || ||
Sbjct 2501991 TTCAATGCCGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 2501932
Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848
||||| || | || ||||| | |||| | | ||||||| || ||||| | |||
Sbjct 2501931 GATTCTATTGAAGGTATTTATGACACTTTAAAGACATGTGCCTTGATTTCAAAAAGTGCT 2501872
Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGA-GGTAC 111907
|||||||| || |||| ||||| | | | ||| | || | | | |||||
Sbjct 2501871 GGTGGTATTGGATTGCATATCCACAACATTCGTTCCA-CTGGTGCCTACATCGCTGGTAC 2501813
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| ||| ||| ||||||||||||||||| |||| || || ||| ||| || || ||
Sbjct 2501812 CAACGGTACTTCAAATGGTATTATTCCAATGGTTCGTGTTTTCAACAACACTGCTCGTTA 2501753
Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATC------TATCGCAGTCTATCTTGAGCCATG 112021
||| | |||| ||| | |||| || | | | || | |||||||| |||||
Sbjct 2501752 TGTGGATCAAGGTGG---TAACAAGAGACCAGGTGCTTTTGCTTTATATCTTGAACCATG 2501696
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081
|||||| |||||| | || ||| |||| | | ||||| ||| | || || |
Sbjct 2501695 GCACGCTGATATCTTTGACTTCATTGAAATTAGAAAGAACCATGGTAAGGAAGAAATTAG 2501636
Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
| || | ||| | ||| | ||||| |||||| | || ||||| ||||||||| |
Sbjct 2501635 AGCTAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTTATGAAAAGAGTTGAGCA 2501576
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
| ||| ||||| | | || | |||| | | || || | | ||| | ||
Sbjct 2501575 AAATGGTGATTGGACATTGTTCTCTCCAAATGAAGCTCCAAACTTGGCTGATACTTATGG 2501516
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261
||| || |||| | | || || |||||| ||||| |||| | | ||| |
Sbjct 2501515 TGACGAATTTGTTGAGTTGTATGAGAAATACGAGAAAGAAGGTCGTGGTAGAAAGACAAT 2501456
Query 112262 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321
|||| | ||||| | | || | || | ||||| ||||||||||| ||||
Sbjct 2501455 CAAAGCTCAAAAATTGTGGTATTCCATCTTGGAGGCACAAACTGAGACTGGTACCCCATT 2501396
Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381
||| | ||||| || || |||||| ||| || ||||| ||||||||||| || ||
Sbjct 2501395 CATGTTGTACAAGGATGCTTGTAACACCAAGTCCAACCAAAAAAATTTGGGTGTTATTAA 2501336
Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441
||||||| | ||| ||||| | |||| | | | |||||| ||||| ||
Sbjct 2501335 ATCTTCCAACTTGTGTTGTGAAATTGTTGAATATTCGGCACCAGATGAAGTTGCTGTTTG 2501276
Query 112442 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT--TTGAT 112499
|||| | || || || ||| | || | | | || | || ||| ||| ||| |
Sbjct 2501275 TAACTTGGCTTCGATTGCTTTACCTTCTTTTATTGAGCAGGATGGTAAG-CATGCTTGGT 2501217
Query 112500 -----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554
| ||| || | || || || || ||| ||| ||| || | || ||||| |
Sbjct 2501216 ACAACTTTGACAAGTTGCATGACGTCACCAAAGTTGTTACACGTAATTTGAATAGAGTCA 2501157
Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614
||||| |||| | ||||| ||| ||| | ||| || ||||||||| | ||||
Sbjct 2501156 TTGATCGAAACTACTACCCAGTTCCTGAAGCTGAGAGATCAAACATGAGACACAGACCAA 2501097
Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT 112674
||| | ||||||||||| | || |||| ||| || ||| | || ||||||||
Sbjct 2501096 TTGCCTTGGGTGTCCAAGGCTTGGCTGATGCATTTATGGTTTTGAGAATCGGATTTGATT 2501037
Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734
|| | ||||| | |||| | ||| | || ||||| ||||| ||||| || ||| |||
Sbjct 2501036 CCCAAGAAGCTAGGGAATTGAATATTCAAATTTTTGAAACAATCTATCATGCTGCTGTTG 2500977
Query 112735 AGGC--GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
| || | || || || || | || || ||||| |||||||| | | || || ||
Sbjct 2500976 AAGCATCAATT--GAATTAGCGGCGGAAGAAGGTCCCTATGAAACTTACCAAGGCTCACC 2500919
Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA--CTAC 112850
||| || ||||| || | |||| || ||||| | | || |||| || | |
Sbjct 2500918 AGCATCGCAAGGTTTGTTGCAATACGACTTGTGGAACAGAAAG-CCAA-CTGAATTGTGG 2500861
Query 112851 GACTGGGACG-CTCTCAAGGAACGCAT-CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908
|| ||||| | | ||| || || | | | | | ||| | | ||| | |||
Sbjct 2500860 GATTGGGATGAATTGAAAGAAAAGCTTGCCA--AACACGGTATGAGAAACTCCTTGTTGG 2500803
Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968
|||| |||||||| || || || || ||||||| |||||||| |||||||| || || |
Sbjct 2500802 TGGCTCCAATGCCTACTGCTTCTACATCACAAATTTTGGGTAACAATGAATGTTTCGAGC 2500743
Query 112969 CCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026
| ||||| | || || || ||| |||||| | || || |||||| ||||| ||
Sbjct 2500742 CATACACTTCAAATATTTACTCT-AGAAGAGTGTTGGCTGGTGAGTTTCAAATTGTTAA 2500685
>seq3
Length=962442
Score = 87.8 bits (96), Expect = 2e-12
Identities = 265/405 (65%), Gaps = 6/405 (1%)
Strand=Plus/Plus
Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946
|||||| | |||||| | | | || | ||| | || ||| ||||| || ||||
Sbjct 732852 ATCAAATCTACCTGGTCTCAATAATGCCTTATCCAAAATGTCAGGACGATTGGTACCGGC 732911
Query 15947 GATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004
| ||||||| | || | || ||||||| || ||||| || ||| | || ||
Sbjct 732912 CAAAACAACAACA--TGATCAGTAGTATCAAACCCGTCCATTTCAACCAATAATTGATTC 732969
Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064
| || | ||| || |||||||| | ||||| |||| || | || || || |
Sbjct 732970 AAGGTGTTTTCACGCTCATCATTGCCACCCATACGACCATTACCTCTTTCTTTACCAATA 733029
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124
|||||||||||||||| || | ||| ||| | || | || || || | |
Sbjct 733030 GCATCAATCTCATCAACAAAAATGATTGCTGGGGCCATATCCCTTGCCGTTTTGAATAAA 733089
Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG-AACA 16183
|| ||||||||| || || ||||||||||||||||| ||||| | | ||| ||||
Sbjct 733090 TCACGTACACGCGATGCACCAACACCAACAAACATCTCAACAAATTCCGATCCGGAAACA 733149
Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243
| || || || ||| | |||||| ||| | ||| || | | |||||||| ||
Sbjct 733150 CT-GAGAAAAGGTACACCTGCTTCACCAGCAGTTGCTTTTGCCAACAAGGTCTTACCTGT 733208
Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||| || |||| | | ||||| || || |||||||| ||
Sbjct 733209 ACCAGGAGGCCCCGACAAAATTGCACCACGAGGGATCTTGGCACC 733253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742330166480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |