Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq4 172 6e-38
>seq4
Length=3023470
Score = 172 bits (190), Expect = 6e-38
Identities = 214/293 (73%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 153733 GTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGAT 153792
|||||| || |||||| || |||||| | ||||| || ||| ||||| | ||||
Sbjct 1509295 GTGAGTTTGGCGCTGATATCGCCTTAGGTACTTCACAAAGATTCGGTGTTCCTTTTGGAT 1509236
Query 153793 ATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTG 153852
|||| ||||| ||||||||||||||||| || | |||||||| ||||| |||||||
Sbjct 1509235 ATGGTGGTCCCCATGCTGCATTCTTTGCCACTTCCCACAAGTATGCCAGAAAAATACCTG 1509176
Query 153853 GCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTAC 153912
| |||||||| || ||| |||||| ||||| ||| | |||||||| | |
Sbjct 1509175 GAAGAATTGTTGGGGTCTCAAAAGATAGATTGGGTAAACCAGCTTTGAGATTAGCTTTGC 1509116
Query 153913 AGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGG 153972
| |||||||| || ||||||| ||||| ||||| || || || ||||||||||| |
Sbjct 1509115 AAACTAGAGAACAACATATCAAAAGAGAGAAAGCTACATCAAATATTTGCACAGCTCAAG 1509056
Query 153973 CACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGA 154025
| | ||||||| || || | | |||||| | |||||||| |||| |||
Sbjct 1509055 CTTTATTGGCTAACATTTCAGCAAACTATGCCGTTTATCATGGACCAGAAGGA 1509003
Score = 93.3 bits (102), Expect = 5e-14
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264
|||| || |||| || ||| || ||| ||| ||||| || || ||||| || |||
Sbjct 1509838 TTATTGGAAAAGGTTATGCTGGTACGATTTTACCACCAGTGATTCAAAGAAAC-TTGTTG 1509780
Query 153265 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323
| | | || |||||||| || || || || |||||| | ||||| ||||| || ||
Sbjct 1509779 GAACTGCCAGAGTGGTACACTTCGTATACCCCATATCAACCAGAGATTTCTCAAGGTCGA 1509720
Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383
||| || ||| || || || ||||| | || ||| | ||||| || || |||
Sbjct 1509719 TTGCAAAGTTTGTTAAACTATCAAACCATGATTACATCCTTAACAGGTTTGGACATGGCA 1509660
Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|||||||| |||| ||||||| || || || || || ||||||
Sbjct 1509659 AACGCATCATTATTGGATGAAGGTACCGCTGCTGCTGAGGCAATG 1509615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212734838560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |