Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq4 163 3e-35
>seq4
Length=3023470
Score = 163 bits (180), Expect = 3e-35
Identities = 212/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 158408 GTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGAT 158467
|||||| || ||| || || |||||| | ||||| || ||| ||||| | ||||
Sbjct 1509295 GTGAGTTTGGCGCTGATATCGCCTTAGGTACTTCACAAAGATTCGGTGTTCCTTTTGGAT 1509236
Query 158468 ACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTG 158527
| || ||||| ||||||||||||||||| || | |||||||| ||||| |||||||
Sbjct 1509235 ATGGTGGTCCCCATGCTGCATTCTTTGCCACTTCCCACAAGTATGCCAGAAAAATACCTG 1509176
Query 158528 GCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTAC 158587
| |||||||| || ||| |||||| ||||| ||| | |||||||| | |
Sbjct 1509175 GAAGAATTGTTGGGGTCTCAAAAGATAGATTGGGTAAACCAGCTTTGAGATTAGCTTTGC 1509116
Query 158588 AGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAG 158647
| |||||||| || ||||||| |||||| ||||| || || || |||||||| ||||
Sbjct 1509115 AAACTAGAGAACAACATATCAAAAGAGAGAAAGCTACATCAAATATTTGCACAGCTCAAG 1509056
Query 158648 CACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGA 158700
| | ||||||| || || | |||||| | |||||||| |||| |||
Sbjct 1509055 CTTTATTGGCTAACATTTCAGCAAACTATGCCGTTTATCATGGACCAGAAGGA 1509003
Score = 111 bits (122), Expect = 2e-19
Identities = 261/384 (68%), Gaps = 10/384 (3%)
Strand=Plus/Minus
Query 159383 AAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGA 159442
||||||| | ||| | || |||| || || ||||| || || ||||||||||||| |
Sbjct 1508308 AAAGAAACATTTGTCTTATTCCAGTCTCTGCTCATGGTACCAACCCTGCATCAGCAGCAA 1508249
Query 159443 TGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAG 159502
|| || |||||||||| ||||| ||| || |||| || ||| | ||||
Sbjct 1508248 TGTGCGGATTGAAAGTTGTTCCAGTCAAATGTTTAGACAATGGTTCTATTGACTTGAAAG 1508189
Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACAT-TTG--AAC-TGTCATGTATTATGATTACA 159558
|| | || |||||| || | || |||| || ||| ||| | || ||||| ||
Sbjct 1508188 AT-TTGA-AAGAAA--AAGCTGAAAAACATGCTGCTAACTTGTGTTCAATCATGATCACT 1508133
Query 159559 TATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCAT 159618
|||||||| || |||| | |||||| | | | | | | | | |||||||||
Sbjct 1508132 TATCCATCCACTTATGGATTGTTTGAACCGGGTGTAAAAGAAGCAATTGACATTGTTCAT 1508073
Query 159619 GAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCA 159678
|||||||||| ||||| | |||||||| || | |||||||| || ||| || ||
Sbjct 1508072 CAGAATGGTGGGTTAGTATACTTGGATGGTGCTAACATGAATGCACAAGTTGGTTTAACA 1508013
Query 159679 AAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738
|| |||| | ||||| ||||| ||||| | || | |||||||| || || |||
Sbjct 1508012 TCCCCTGGTGATTTAGGTGCTGATGTTTGTCACTTGAATATCCATAAGAC-TTTTGCATT 1507954
Query 159739 -CCACATGGAGGTGGAGGTCCTGG 159761
||||| ||||| || |||||
Sbjct 1507953 GAGTCATGGTGGTGGTGGACCTGG 1507930
Score = 84.2 bits (92), Expect = 3e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939
|||| || |||| || ||| || || ||| ||||| || || ||||| || |||
Sbjct 1509838 TTATTGGAAAAGGTTATGCTGGTACGATTTTACCACCAGTGATTCAAAGAAAC-TTGTTG 1509780
Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998
| | | || |||||||| || || || || |||||| | ||||| ||||| || ||
Sbjct 1509779 GAACTGCCAGAGTGGTACACTTCGTATACCCCATATCAACCAGAGATTTCTCAAGGTCGA 1509720
Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058
||| || ||| || || || ||||| | || ||| | ||||| | || |||
Sbjct 1509719 TTGCAAAGTTTGTTAAACTATCAAACCATGATTACATCCTTAACAGGTTTGGACATGGCA 1509660
Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
|||||||| |||| ||||||| || || || || || ||||||
Sbjct 1509659 AACGCATCATTATTGGATGAAGGTACCGCTGCTGCTGAGGCAATG 1509615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051133844240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |