Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 297 2e-74 seq7 273 2e-67 seq4 219 3e-51 seq8 201 9e-46 seq5 100 2e-15 >seq1 Length=957321 Score = 297 bits (328), Expect = 2e-74 Identities = 394/542 (73%), Gaps = 10/542 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG-TTTGGCAAAATGGTA 550049 |||| | ||||| ||||||||||||||||| |||||| | | ||| ||||| || || Sbjct 75360 AGCTGTTGGTATTGATTTAGGAACCACATACTCTTGTGTGGCTCATTTCGCAAA-TGATA 75302 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||| | |||| Sbjct 75301 GAGTTGAAATTATTGCTAATGACCAAGGTAACAGAACTACACCATCTTTTGTTGCATTCA 75242 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 | || |||||| ||| ||||||||||||| || ||||||| || || ||| ||| Sbjct 75241 CTGATACTGAAAGGTTAATTGGTGATGCAGCCAAGAATCAAGCTGCTATCAACCCTGCCA 75182 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| |||| |||||||||||||||||||| |||| ||| ||||| | ||||| Sbjct 75181 ACACTGTTTTCGATGCTAAACGTTTAATTGGTAGAAAATTTGATGATCCAGAAGTTCAAA 75122 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 ||||| ||||||| || ||| || || || | ||| ||||| | ||| ||| Sbjct 75121 ATGATATCAAGCATTTTCCATTCAAAGTTATTGACAAGGGTGGTAAACCAAACATTCAAG 75062 Query 550290 CTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | |||| || || ||| ||| | |||||| |||| ||||| |||||| Sbjct 75061 TTGAATACAAAGG---TG-AAACCAAGGTTTTTACCCCAGAAGAAATCTCATCCATGGTT 75006 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || | |||||||| || || | ||| | ||| |||| ||||| || Sbjct 75005 TTGGTTAAAATGAAGGAAGTTGCTGAAGGTTTCTTGGGTGGTACTGTTAAAGATGCTGTT 74946 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | ||||| ||||| || ||||| || || ||| | |||||||| || |||||||| Sbjct 74945 GTTACTGTTCCAGCTTACTTTAACGATTCTCAAAGACAAGCTACCAAGGATGCTGGTTTA 74886 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 |||||||| | |||||| | | |||||||| || || ||||||||||| |||| ||| Sbjct 74885 ATTGCTGGTTTGAATGTTTTGAGAATTATCAACGAGCCAACTGCTGCTGCCATTGCTTAT 74826 Query 550526 GG 550527 || Sbjct 74825 GG 74824 Score = 273 bits (302), Expect = 2e-67 Identities = 498/725 (69%), Gaps = 18/725 (2%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| |||||||| || || | | ||||| | |||||||| | |||||| Sbjct 74582 AGAACTGCTTGTGAAAGAGCAAAGAGAACCTTGTCATCATCTGCTCAAACCTCAATTGAA 74523 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | |||||||| | ||| || ||||| | | | || | || | || || | ||||||| Sbjct 74522 ATTGATTCATTGTATGAAGGTATTGACTTTTACACTTCAATCACTAGAGCTAGATTTGAA 74463 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| |||| | || ||| || | || ||||| ||| ||||||| | ||| Sbjct 74462 GAATTGTGTGCTGACTTATTCAGATCCACTTTGGACCCAGTTGAAAAAGTTTTGAAGGAT 74403 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | |||||||| || || |||| | |||||||| ||||||||||| || || |||||| Sbjct 74402 GCCAAGATTGACAAGTCACAAGTTGAAGAAATTGTCCTTGTTGGTGGTTCAACCAGAATT 74343 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 || || |||| ||| || ||| || |||||||||||| |||| || | | Sbjct 74342 CCAAAGATTC---AAAAATTGGTTTCCGATTTCTTCAATGGTAAAGAATTGAACAAGTCT 74286 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 | || |||||||| |||||||| |||||||| || | ||||| || || | | || Sbjct 74285 ATCAACCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTCCAAGCTGCCATCTTGACCGGT 74226 Query 552267 CAAACT--GATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 | ||| | || | | | | || |||| ||| |||||| |||| | || | | Sbjct 74225 GACACTTCGTCCAAGACCCAGGATATCTTGTTGTTG--GATGTTGCTCCATTGTCATTAG 74168 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 || | ||||| | ||| ||||| ||||| || | || |||||| |||||||||| Sbjct 74167 GTATTGAAACTGCTGGTGGTATCATGACCAAATTGATTCCAAGAAATGCTACTATTCCAA 74108 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 || || || || || || ||| | ||||| ||| | | ||| |||||| Sbjct 74107 CCAAGAAGTCCGAAACCTTCTCCACCTATGCTGATAACCAACCAGGTGTCTTGATTCAAG 74048 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAAT 552500 | |||||||| |||||| || || || || |||||| |||| || | Sbjct 74047 TGTTTGAAGGTGAAAGAGCCAAGACCAAGGACAA----CAACTTGTTGGGTAAATTCGAA 73992 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 ||| |||||||| || || || | || || || ||||| ||||||||||| |||||| Sbjct 73991 TTATCTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATCGAAGTTACTTTTGATATC 73932 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAAT 552620 ||||||||||| || |||||||| |||||| || || || | |||| | |||| Sbjct 73931 GATGCCAATGGTATCTTGAATGTTTCTGCTTTGGAAAAGGGTACCGGAAAGACTCAAAAG 73872 Query 552621 ATTAC 552625 ||||| Sbjct 73871 ATTAC 73867 >seq7 Length=2235583 Score = 273 bits (302), Expect = 2e-67 Identities = 650/974 (67%), Gaps = 28/974 (3%) Strand=Plus/Plus Query 551780 AGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATG 551839 ||||||| ||| ||| |||| | ||||| |||||||| ||||| ||| |||| | Sbjct 1481871 AGCTACTGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGATAACAGATTGGTTAACTT 1481930 Query 551840 GTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA-AGCTC 551898 | | |||| || || |||| ||||| ||| | ||| | | || ||| Sbjct 1481931 TTTCATCCAAGAATTCAAGAGAAAGAACAAGAAGGATATTTCTGG-TAACCAAAGAGCAT 1481989 Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 | | | |||||||||| || |||||||| || || | | ||||| | |||||| Sbjct 1481990 TGAGAAGATTAAGAACTGCATGTGAAAGAGCAAAGAGAACCTTGTCATCATCTGCTCAAA 1482049 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 || | |||||| | |||||||| | ||| || || || | | | || | || | || | Sbjct 1482050 CCTCAATTGAAATTGATTCATTGTATGAAGGTATCGACTTTTACACTTCAATCACTAGAG 1482109 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 | | ||||||||| | ||| |||| | || ||| || | || ||||| ||| ||| Sbjct 1482110 CTAGATTTGAAGAATTGTGTGCTGACTTATTCAGATCCACTTTGGACCCAGTTGAAAAAG 1482169 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 |||| | ||| | |||||||| || || |||| | |||||||| ||||||||||| | Sbjct 1482170 TTTTGAAGGATGCCAAGATTGACAAGTCACAAGTTGAAGAAATTGTCCTTGTTGGTGGTT 1482229 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAAT 552195 | || |||||||| ||| ||| ||| || ||| || |||||||||||| ||| Sbjct 1482230 CAACCAGAATTCCAAAAGTTC---AAAAATTGGTTTCCGATTTCTTCAATGGTAAAGAAT 1482286 Query 552196 TAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255 | || | | | || |||||||| |||||||| || ||||| || | ||||| || | Sbjct 1482287 TGAACAAGTCTATCAACCCAGATGAAGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCCA 1482346 Query 552256 TTCTTTCTGGACAAAC-TGATGAAAAACTACAAAATA--TTGTACTTGTAGATGTTACTC 552312 | | | || | || | || || || ||| ||| |||| ||| |||||| ||| Sbjct 1482347 TCTTGACCGGTGACACTTCATCCAAGAC-CCAAGATATCTTGTTGTTG--GATGTTGCTC 1482403 Query 552313 CTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATA 552372 | | || | ||| | ||||| | ||| ||||| ||||| || | || |||||| Sbjct 1482404 CATTGTCATTAGGTATTGAAACTGCTGGTGGTATCATGACCAAATTGATTCCAAGAAATG 1482463 Query 552373 CTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTG 552432 ||||||| || || || || || || || ||| | ||||| ||| | | || Sbjct 1482464 CTACTATCCCAACCAAGAAGTCCGAAACCTTCTCCACCTATGCTGATAACCAACCAGGTG 1482523 Query 552433 TTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT---- 552488 | |||||| | |||||||| |||||| || || || || |||||| Sbjct 1482524 TCTTGATTCAAGTGTTTGAAGGTGAAAGAGCCAAGACCAAGGACAA----CAACTTGTTG 1482579 Query 552489 GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTT 552548 |||| || | ||| |||||||| || || || | || || || |||||||||||| Sbjct 1482580 GGTAAATTCGAATTATCTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATTGAAGTT 1482639 Query 552549 ACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAAC 552608 ||||| ||||||||||||||||| || |||||||| |||||| || || || | Sbjct 1482640 ACTTTTGATATCGATGCCAATGGTATCTTGAATGTTTCTGCTTTGGAAAAGGGTACCGGA 1482699 Query 552609 AAGAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAA 552668 |||| | |||| ||||| | || |||||||| | | ||| | ||| || Sbjct 1482700 AAGACTCAAAAGATTACCATCACCAACGATAAAGGTAGATTATCCAAAGAAGATATTGAA 1482759 Query 552669 CGTATGGTCGAAGAAGCTAAAGAATTTGAAGAAGCTGATAATAAGAGAAAATCTGCT--- 552725 ||||| | |||||| || | || | |||| ||| | || | || ||||| Sbjct 1482760 AAGATGGTTAACGAAGCTGAAAAGTTCAAGGAAGAAGATGAAAA---AGAAGCTGCTAGA 1482816 Query 552726 GTCGATGCCAAGAA 552739 ||| | |||||||| Sbjct 1482817 GTCCAAGCCAAGAA 1482830 Score = 257 bits (284), Expect = 1e-62 Identities = 384/541 (71%), Gaps = 8/541 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||||||||||||||||| |||||||| | | ||| | | Sbjct 1481223 AGCTGTCGGAATTGATTTAGGAACCACATACTCTTGTGTTGCTCACTATGCAAACGACAG 1481282 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||| | ||||| Sbjct 1481283 AGTTGAAATTATTGCTAATGACCAAGGTAACAGAACTACACCATCTTTTGTTGCATTCAC 1481342 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || |||||| ||| |||||||||| || || ||||||| || || ||| |||| Sbjct 1481343 TGATACTGAAAGATTAATTGGTGATGCTGCCAAGAATCAAGCTGCTATCAACCCTGCCAA 1481402 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| |||| |||||||||||||||||||| |||| ||| ||||| | || || Sbjct 1481403 CACTGTTTTCGATGCTAAACGTTTAATTGGTAGAAAATTTGATGATGCTGAAGTCCAAAA 1481462 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||| | || || | || ||| || ||||| | ||| || || | ||| ||| Sbjct 1481463 CGATCTTAAACACTTTCCATTCAAAGTTGTTGACAAGGGTGGTAAGCCAAACATTCAAGT 1481522 Query 550291 TACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTATGGTTT 550346 | | |||| || || ||| |||||| |||||| |||| ||||| ||||| | Sbjct 1481523 TGAATACAAAGG---TG-AAACCAAGGTTTTCACCCCAGAAGAAATCTCATCCATGGTAT 1481578 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | || ||||| |||| || | || | ||| |||| ||||| || Sbjct 1481579 TGGGTAAGATGAAGGAAACTGCTGAAGGTTACTTGGGTGGTACTGTTAAAGATGCTGTTG 1481638 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||| ||||| || ||||| || || ||| | |||||||| || |||||||| | Sbjct 1481639 TTACTGTTCCAGCTTACTTTAACGATTCTCAAAGACAAGCTACCAAGGATGCTGGTTTAA 1481698 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | |||||| | | |||||||| ||||| ||||||||||| |||| |||| Sbjct 1481699 TTGCTGGTTTGAATGTTTTGAGAATTATCAACGAACCAACTGCTGCTGCCATTGCTTATG 1481758 Query 550527 G 550527 | Sbjct 1481759 G 1481759 Score = 116 bits (128), Expect = 3e-20 Identities = 270/406 (67%), Gaps = 12/406 (3%) Strand=Plus/Plus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 |||||| |||||||| ||||| || | |||||||| ||||||| | ||| ||| |||| Sbjct 1097890 TGTTAACCCAGATGAAGCTGTCGCTTTGGGTGCCGCCATTCAAGGTGGTATCCTTGCTGG 1097949 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 |||| || || || | || | | ||||||||||| | || | || Sbjct 1097950 ---------TGAAGT--TA-AAGATGTCGTTTTGTTGGATGTTACTCCATTGTCCTTGGG 1097997 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | ||||| | || ||| || | ||| | || | |||||| || |||||||| Sbjct 1097998 TATTGAAACCATGGGTGGTGTTTTCGCTAGATTGATTGCTAGAAACACCACTATTCCAGC 1098057 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || ||||| | | || || || || | | ||||| | ||| ||| | | Sbjct 1098058 CAAGAAATCACAAATTTTCTCAACTGCATCTGCTGGACAAACCTCGGTTGAAATCAGAGT 1098117 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 ||| |||| |||||| |||| || | ||| || || |||||| |||| || Sbjct 1098118 TTTCCAAGGTGAAAGAGAATTGACCAGAGACAACAAGTTGATTGGTAACTTTACCTTGTC 1098177 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 ||||||||| || || || || || || ||||||||||| |||||||| || ||| | Sbjct 1098178 AGGTATTCCACCAGCACCAAAAGGTGTTCCACAAATTGAAGTCACTTTCGACATTGATAC 1098237 Query 552566 CAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAG 552611 |||| || | || || ||||| |||||||| || ||||||| Sbjct 1098238 TGATGGTATCATTAAGGTTTCTGCTCGTGATAAAGCTTCCAACAAG 1098283 >seq4 Length=3023470 Score = 219 bits (242), Expect = 3e-51 Identities = 341/484 (70%), Gaps = 14/484 (3%) Strand=Plus/Minus Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||||||||||||||| |||||||||||| ||||| |||| ||| |||| || Sbjct 1179754 AGTTGAAATTATTGCCAATGAACAAGGTAACAGAGTCACTCCTTCTTTTGTCGCTTTTAC 1179695 Query 550111 G-GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 | | || ||| | |||||||||| || || ||||||| || || || | | Sbjct 1179694 TAGTGAAGAAAGATTGA-TTGGTGATGCTGCCAAGAATCAAGCTGCTTTGAACCCAAAAA 1179636 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| ||||||||||||| ||||||||||| ||| |||| ||||| | ||||| Sbjct 1179635 ACACTGTTTTTGATGCTAAGCGTTTAATTGGTAGAGCTTTTGATGATGAATCCGTTCAAA 1179576 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 ||||| ||| ||||| ||| | || || |||| |||| |||| | ||||| | Sbjct 1179575 AGGATATCAAGTCATGGCCATTCAAGGTTATTGATGTCAATGGACAACCACAAATTGAGG 1179516 Query 550290 CT--ACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGG 550343 | | | || | || || ||| ||||| ||| || |||| || || |||| Sbjct 1179515 TTGAATACTTGGATGA------AACCAAGACTTTTTCCCCACAAGAAATCTCTTCAATGG 1179462 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 |||| | || ||||| ||| || ||| ||||| || | ||| | || | Sbjct 1179461 TTTTGACCAAGATGAAGGAAATTGCTGAAGCTAAAATTGGTAAAAAGGTTGAAAAAGCCG 1179402 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||| ||||| || ||||||||| | ||| | |||||||| || |||||||| Sbjct 1179401 TTATCACTGTCCCAGCTTACTTTAATGACGCTCAAAGACAAGCTACCAAGGATGCTGGTG 1179342 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | || ||| | | |||||||||||||| ||||||||||| |||| | Sbjct 1179341 CCATTGCTGGTTTGAACGTTTTGAGAATTATCAATGAACCAACTGCTGCTGCCATTGCCT 1179282 Query 550524 ATGG 550527 |||| Sbjct 1179281 ATGG 1179278 Score = 176 bits (194), Expect = 4e-38 Identities = 419/623 (67%), Gaps = 14/623 (2%) Strand=Plus/Plus Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 ||||| | || || || |||| || ||||||| | || |||| || ||||||| Sbjct 2934586 TTGAAATTGACTCCTTTGTTGATGGTATTGATTTTTCAGAAACTCTTTCTAGAGCCAAAT 2934645 Query 552025 TTGAAGATATTTGTTCTGATCTCTTT-AGAAAAACAATTGAA-CCAGTAGAACAAGTTTT 552082 ||||||| ||| || || || ||||| || ||||| ||||| ||||||||||| Sbjct 2934646 TTGAAGA-ATTAAACATGGCTTCATTCAGAAAGACC-TTGAAGCCAGTTGAACAAGTTTT 2934703 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| || || | || ||| | | |||| ||||| | |||||||| || || Sbjct 2934704 GAAGGATGGTAATGTTAAAAAGTCCGATATTGATGATATTGTCTTGGTTGGTGGTTCCAC 2934763 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 ||||||||| ||| ||| ||| | || | || ||| | ||| ||||| | Sbjct 2934764 AAGAATTCCAAAAGTTCAAGAATTATTGGAACAATTCTTTGA-TGGCAAAAAGGCATCCA 2934822 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 || || ||||||||||||| |||||||| |||||||| || ||||||||| | | | Sbjct 2934823 AAGGTATTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCAGGTGTCTTGA 2934882 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATCT 552320 ||| ||| ||| | | ||||||| |||| | ||||| | ||| | || Sbjct 2934883 GTGG------TGAAGAAGGTGTCGATGATATTGT-CTTGTTGGATGTCAATCCATTGACT 2934935 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 | ||| | ||||| || ||| ||||||| | | | || |||||||| ||||| Sbjct 2934936 TTGGGTATTGAAACTTCAGGTGGTGTTATGACCACTTTGATTAGAAGAAATACCGCTATT 2934995 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || || || |||| | || || || | | ||||| ||| | ||||| |||| Sbjct 2934996 CCAACCAAGAAGTCTCAAATTTTCTCCACTGCTGCTGATAACCAACCAACTGTTTTAATT 2935055 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 ||| ||| ||||| ||||||| | | | ||||| || || | | |||| || | Sbjct 2935056 CAAGTTTACGAAGGTGAAAGAACAATGGCCAAAGACAACAACAGATTGGGTAAATTCGAA 2935115 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || |||||||| || || || | || || || ||||||||||| || ||| | | Sbjct 2935116 TTGACTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATTGAAGTCACATTCTCTTTG 2935175 Query 552561 GATGCCAATGGAATTTTGAATGT 552583 ||||||||||| || ||||| || Sbjct 2935176 GATGCCAATGGTATCTTGAAAGT 2935198 Score = 159 bits (176), Expect = 3e-33 Identities = 370/552 (67%), Gaps = 18/552 (3%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| || || ||||| || || || || |||||||||||| | | ||||| ||||| Sbjct 2933762 TATTGGAATCGATTTGGGTACTACGTACTCATGTGTTGGTGTTATGAAGAATGGAAAAGT 2933821 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||| | ||||| ||||||||||| |||| |||||||| |||||| | |||| | Sbjct 2933822 TGAAATACTAGCCAACGATCAAGGTAATAGAATAACTCCATCGTATGTTGCATTCAATGG 2933881 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 |||| || |||||||| ||||| ||| ||||||| || ||| | ||| || Sbjct 2933882 TGATGAAAGATTGGTTGGTGACGCAGCCAAAAATCAAGCTGCTTCCAATGTCAACAACAC 2933941 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | |||||| ||| | || ||||| || | ||||||| |||||||| || Sbjct 2933942 AGTGTTTGATATCAAAAGATTGATTGGCTTAAAGTATAATGATGACACTGTTCAAAAGGA 2934001 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAA---ACC--TTATA----T 550284 |||||||| ||| | | | |||| || || || ||| || || | Sbjct 2934002 ATTGAAGCATATGCCATACAAGATTGAAAA---CAAGGGCAACAGACCGGTTGTATCTGT 2934058 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 |||| ||| ||| | | ||| ||| |||||||| ||||||| |||| | Sbjct 2934059 TGAA--TAC-AATGGCGAA---CAAAAAGTATTCACACCAGAAGAAATTTCGGGTATGAT 2934112 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| ||| ||||| || || | | ||||| | ||||||| | || || Sbjct 2934113 TTTGGGGAAGATGAAGTCAATCGCTGAGGAGTACCTTGGTAAGAAAGTTACCCACGCTGT 2934172 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | ||||| ||||| || |||||||| | ||| | ||||| ||||| |||||||| Sbjct 2934173 TGTCACTGTTCCAGCCTACTTTAATGATGCCCAAAGACAAGCAACTAAGGATGCTGGTAC 2934232 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||||||| | || ||| | | ||| | |||||||| || || || || |||| || Sbjct 2934233 TATTGCTGGTTTAAACGTTTTGAGAATTGTTAATGAACCAACAGCCGCCGCTATTGCCTA 2934292 Query 550525 TGGACTTGATAA 550536 |||| | || || Sbjct 2934293 TGGATTGGACAA 2934304 Score = 158 bits (174), Expect = 1e-32 Identities = 260/370 (70%), Gaps = 14/370 (4%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| |||||||| || || | | || |||||||||||||| ||| ||||| Sbjct 1179036 AGAACTGCTTGTGAAAGAGCAAAGAGATCATTGTCTTCTGGTACTCAAACAACTGTTGAA 1178977 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG--AGGGCCAAATTTG 552027 | || || || ||||| || |||| | |||| || || || || | ||| | Sbjct 1178976 ATTGACTCTTTGTTTGATGGTGAAGATTTC--TCCGCCAATATCACCAGAGCTAGATTCG 1178919 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 ||||||| | ||| | | || | || | |||||||| ||||||||||| | | Sbjct 1178918 AAGATATCAATGCTGCTTTGTTCAAGTCTACTTTGGAACCAGTTGAACAAGTTTTGAAGG 1178859 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 || | ||| || | || || |||| ||||| |||| ||||||||||| || || |||| Sbjct 1178858 ATGCCAAGGTTAACAAGTCTCAAGTTGATGAAGTTGTCCTTGTTGGTGGTTCAACCAGAA 1178799 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGT-TCTTATTTCAATGGTAAAAAATT----AAATGA 552202 |||| ||| ||| || |||| | ||| ||| |||||||| |||| |||| | Sbjct 1178798 TTCCAAAAGTTCAAAAATTGTTGTCTGACTTCTTT-GATGGTAAACAATTGGAAAAATCA 1178740 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | || || ||||| |||||||| |||||||| || |||||| ||||| | | Sbjct 1178739 A----TCAACCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGGTGCTATCTTGAC 1178684 Query 552263 TGGACAAACT 552272 ||| ||| || Sbjct 1178683 TGGTCAATCT 1178674 >seq8 Length=898305 Score = 201 bits (222), Expect = 9e-46 Identities = 392/570 (69%), Gaps = 18/570 (3%) Strand=Plus/Minus Query 368596 TCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAA 368655 ||||||| |||| |||||| || ||||| ||| | ||| |||||| ||||||| Sbjct 384445 TCAAGAAACAGGTATTGGGGTACGCCAATCCCAATTTGGGTCAGTGATGACTTTGAAGAA 384386 Query 368656 ATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGT 368715 ||||||||||| || |||||| | |||||| | ||||| || || | | |||| | Sbjct 384385 ATTGTTTGTATTGGATCAATTGACGAATTGAAGGAATTGTCAGGCAGAGACGACATTACT 384326 Query 368716 GATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTA 368775 ||| | ||| ||| | |||||| ||| |||||||| || || || |||||| Sbjct 384325 GATATCCATCGTGAAAGTATTGATTCTGTTACCATTCCATCCAAAAAGGGTAAAGGTGAG 384266 Query 368776 TTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGG- 368834 ||| || |||||| ||| || ||||| ||||||||||| |||||||||||||||| Sbjct 384265 TTGAAGAGAATTGAAGAAGTGTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCA 384206 Query 368835 TCAAATACATTATCCATTTGATA--ACGCAAAATACTTTGATAATGATAAAGATTATGTG 368892 ||||| ||||||||||||||| | | ||||| | || || ||| ||| Sbjct 384205 TCAAA-ACATTATCCATTTGAAAATAAGCAAA--AGTTCCATGATG-----CATT-CCCA 384155 Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 || | ||| | | ||| | ||||| ||| | |||||||||||||| | |||| Sbjct 384154 GCAAACTTTATTTCTGAAGGTTTAGATCAGACAAGAGGTTGGTTTTATACATTGACAGTA 384095 Query 368953 TTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTT 369012 || || | | ||| | | | | ||| | ||||||| || || |||||||| ||| Sbjct 384094 TTGGGAACTCATTTGTTCAACACAGCTCCTTATGAAAATGTTATCGTTACTGGTATCGTT 384035 Query 369013 AATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATT 369072 || | |||||| | |||||||| ||| || | || ||| | ||||| | | | Sbjct 384034 TTAGCTGCCGATGGTAAGAAGATGTCCAAACGTTTGAAAAACTATCCTGATCCAACTTTA 383975 Query 369073 TTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTG-TCA--TCACCTGTA 369129 | | || || | |||||||||| | |||||||| ||| ||| ||| ||||| ||| Sbjct 383974 GTCTTGGACAAGTATGGTGCTGATGCATTGAGATTGTAC---TTGATCAACTCACCAGTA 383918 Query 369130 GTAAAAGCAGAATCTATTAAATTTGATGAA 369159 | | ||| ||| | | || ||| | ||| Sbjct 383917 TTGAGAGCTGAAACCTTAAAGTTTAAAGAA 383888 >seq5 Length=2091826 Score = 100 bits (110), Expect = 2e-15 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2075483 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2075542 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2075543 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATT 2075602 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || |||||||| | ||||| | Sbjct 2075603 GTCAATAGTGTCTGA-TGATTCAACCTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGA 2075661 Query 563462 CGAAAATTTGCATA 563475 |||||||||||||| Sbjct 2075662 CGAAAATTTGCATA 2075675 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2075711 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2075770 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2075771 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATT 2075830 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || ||||| || | ||||| | Sbjct 2075831 GTCAATAGTGTCTGA-TGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGA 2075889 Query 563462 CGAAAATTTGCATA 563475 |||||||||||||| Sbjct 2075890 CGAAAATTTGCATA 2075903 Score = 95.1 bits (104), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | | |||||| |||||| | |||||| || ||||| Sbjct 2075939 TTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 2075998 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| ||||| || ||||| |||||||| ||||| || || ||| || Sbjct 2075999 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTT 2076058 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| || || | ||| | | || | || | || ||||| || | ||||| | Sbjct 2076059 GTCAATAGTGTCTGA-TGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGA 2076117 Query 563462 CGAAAATTTGCATAGACATCTTGGTT 563487 ||||||||||||| | | ||||||| Sbjct 2076118 CGAAAATTTGCATTGTGA-CTTGGTT 2076142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295524039410