Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq5 178 2e-39
seq3 174 3e-38
>seq5
Length=2091826
Score = 178 bits (196), Expect = 2e-39
Identities = 182/238 (76%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||||| | ||||| ||| ||
Sbjct 2075894 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTT 2075953
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| || |||||| ||| || |||||||| || |||||||| ||||| |||||
Sbjct 2075954 GTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTG 2076013
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || |||||||| ||||| || |||| ||| | || |||||| || ||
Sbjct 2076014 ATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGA 2076073
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|||||||| |||| || || || ||||| || | ||||| || || |||||||||
Sbjct 2076074 TGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131
Score = 176 bits (194), Expect = 8e-39
Identities = 181/237 (76%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||||| | ||||| ||| ||
Sbjct 2075666 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTT 2075725
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| || |||||| ||| || |||||||| || |||||||| ||||| |||||
Sbjct 2075726 GTAGTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTG 2075785
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || |||||||| ||||| || |||| ||| | ||| |||||| || ||
Sbjct 2075786 ATCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGA 2075845
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| |||| || || || ||||| || | ||||| || || ||||||||
Sbjct 2075846 TGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 165 bits (182), Expect = 1e-35
Identities = 177/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 193127 TTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATA 193186
||| | |||||||||||||| | |||| || ||||| | ||||| ||| || ||
Sbjct 2075441 TTAAAAACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTA 2075500
Query 193187 GTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATC 193246
|||||| || |||||| ||| || |||||||| || |||||||| ||||| ||||||||
Sbjct 2075501 GTCGGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATC 2075560
Query 193247 AGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGA 193306
|| || || |||||||| ||||| || |||| ||| | ||| |||||| || || ||
Sbjct 2075561 TGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGA 2075620
Query 193307 CTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| |||| || || || ||||| || | ||||| || || ||||||||
Sbjct 2075621 TTCAACCTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
>seq3
Length=962442
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| ||||| |||| || || || || ||||||||
Sbjct 22568 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 22509
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 22508 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 22449
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || ||||| || |||| || | ||| ||| || || || ||||||||
Sbjct 22448 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 22389
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| ||| || |||||||| || || ||||| ||||| |||||||||
Sbjct 22388 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654298788880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |