Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq4 271 1e-67
seq5 165 1e-35
seq3 134 2e-26
>seq4
Length=3023470
Score = 271 bits (300), Expect = 1e-67
Identities = 593/893 (66%), Gaps = 24/893 (3%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||||||| ||||||| || || || || || || | || || ||
Sbjct 2626928 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2626869
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950
| |||||||||||||||||| || ||| ||| ||||| | || | | | || ||
Sbjct 2626868 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTT-TGTTACCCAAAGCAACCAA 2626810
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
|||||| ||||| ||||||||||||||||| |||| || | ||||||||| ||||| ||
Sbjct 2626809 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2626750
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
||| ||| ||||||||| || ||||||||||| ||||| || |||| |||| ||
Sbjct 2626749 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2626690
Query 39071 cataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACAT 39128
| || | || ||| | | | | ||| || | |||| ||| | | || |||
Sbjct 2626689 TCT--TTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGA---GCAAACAACAAGCAT 2626635
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|||||||| || ||||||||||| || | | | || |||||||| ||| || ||||||
Sbjct 2626634 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2626575
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAA---CTACTAGAAAAGAAT 39245
||||||||||||||||| || | ||| || || || ||||| | ||| ||||||
Sbjct 2626574 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGA-- 2626517
Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCT 39302
||||||| ||| ||||| || | | ||| | |||||| || ||| ||||
Sbjct 2626516 -TACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACA---ATGCATCGGAATCT 2626461
Query 39303 AAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCT 39362
|||||| | ||||||||||| || || ||||| || ||| || |||| |||||
Sbjct 2626460 TGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCA 2626401
Query 39363 TTAAATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATAC 39422
|| ||||| || |||||
Sbjct 2626400 TTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAA 2626341
Query 39423 ATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAA 39482
|||| ||||| | |||||| ||||| || ||||||| | ||||| | |
Sbjct 2626340 GTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGA 2626281
Query 39483 TACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCT 39542
|||||||| | | | || ||| || || || ||| |||||||||||||| ||
Sbjct 2626280 ATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCA 2626221
Query 39543 GCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTC---C 39599
||||| || || || | | ||| ||| ||||||| || || || || || |
Sbjct 2626220 GCGAAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTC 2626161
Query 39600 CAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGAT 39659
||| | |||||| || |||||| | ||||||| ||||| || |||||| | |
Sbjct 2626160 CAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCC 2626101
Query 39660 TTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCG 39712
|| || |||||||| | || ||| | | ||| ||||| | ||||| ||
Sbjct 2626100 TTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACG 2626048
>seq5
Length=2091826
Score = 165 bits (182), Expect = 1e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898
|| ||||||||| | || || || || ||||| || | ||||| ||| || || ||
Sbjct 2075444 AAAACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTC 2075503
Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
|| |||| || | || ||||||||||||||||||||||| ||||| ||||| || ||
Sbjct 2075504 GGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGG 2075563
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018
||| || |||||||| ||||| || || ||| ||||| ||||| ||||| |||||
Sbjct 2075564 TGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTC 2075623
Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| || ||||| |||||||| |||||||| | ||| || |||||
Sbjct 2075624 AACCTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || || || | ||||| ||| || || ||
Sbjct 2075673 ATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCG 2075732
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || ||||||||||||||||||||||| ||||| ||||| || |||
Sbjct 2075733 GACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 2075792
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || || ||| ||||| ||||| ||||| |||||
Sbjct 2075793 GGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCA 2075852
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| || ||||| ||||| || |||||||| | ||| || |||||
Sbjct 2075853 ACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 150 bits (166), Expect = 3e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || || || | ||||| ||| || || ||
Sbjct 2075901 ATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCG 2075960
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || ||||||||||||||||||||||| ||||| ||||| || |||
Sbjct 2075961 GACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 2076020
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || || ||| || || ||||| ||||| || ||
Sbjct 2076021 GGAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCA 2076080
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| |||| || ||||| ||||| || |||||||| | ||| || ||||||
Sbjct 2076081 ACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131
>seq3
Length=962442
Score = 134 bits (148), Expect = 2e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || || || ||||||| || || || || || || ||
Sbjct 22568 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 22509
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|||| || | || |||||||||||||||||||| || ||||| ||||| || |||||
Sbjct 22508 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 22449
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|||||||| || ||||| || || || ||||| || || || || || || ||
Sbjct 22448 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 22389
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| ||| ||||||||||| || | ||||| | || || ||||||
Sbjct 22388 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135898172200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |