Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 172 2e-37 seq3 89.7 2e-12 >seq4 Length=3023470 Score = 172 bits (190), Expect = 2e-37 Identities = 621/955 (65%), Gaps = 21/955 (2%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTC 155644 |||| || |||| ||||| || ||| || | | | || || | ||||| ||||| || Sbjct 2501259 CAATCGAAGCCAAGTTACAAACAGCAA-CTTCATCTGGT-GCCGAATATTCAACAATTTC 2501316 Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704 ||| |||| ||| ||| || || || ||||| || ||||| || || ||||||| Sbjct 2501317 ACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACA 2501376 Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764 |||||||||||| | ||| ||||||| || ||||| | ||||| |||| || Sbjct 2501377 AGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATA 2501436 Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATA 155824 ||| | | | || || ||| ||| | | ||||| ||| |||||| ||| Sbjct 2501437 CCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTCTCGTATTTCTCATA 2501496 Query 155825 CAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCA-GTCCAGGGCACTTATCGGGGCA 155881 || | || || || ||||| ||| |||| || || | || | || || | Sbjct 2501497 CAAC--TCAACAAATTCGTCACCATAAGTATCAGCCAAGTTTGGAGCT-TCATTTGGAGA 2501553 Query 155882 AAACAGCGACCAA--ATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939 |||| | |||| | | || | | || | | |||||| | ||| ||| Sbjct 2501554 GAACAATGTCCAATCACCATTTTGCTCA--ACTCTTTTCATAAACAAATCTGGGATCCAC 2501611 Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999 | ||| ||| | ||| || || | || || | || || ||||| | | || Sbjct 2501612 AAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCA 2501671 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059 | ||| || ||||||| || ||| || ||||| | ||||||| ||| ||| Sbjct 2501672 ATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTC 2501731 Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 ||| ||||| ||||| ||||| |||||||| || ||||| |||| | ||| |||||| Sbjct 2501732 TTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATA 2501791 Query 156117 ATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATG 156175 |||||||| ||||| || ||||| || ||| || | | ||||| || |||| || || Sbjct 2501792 ATACCATTTGAAGTACCGTTGGTACCAGCG-ATGTAGGCACCAGTGGAACGAATGTTGTG 2501850 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 ||||| | |||||||||||| | | ||| ||||| || ||| ||||| ||| | Sbjct 2501851 GATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTC 2501910 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 ||||||||||||||||||| |||| ||||| | | | || || | ||| || Sbjct 2501911 ATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGG 2501970 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 | ||| || || || ||||| | || | ||||| |||| || | | |||||| Sbjct 2501971 TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACAT 2502030 Query 156356 ATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414 ||| ||| ||||| ||| |||| | || || || |||| |||| || | Sbjct 2502031 CAAATTGTAAGTCTCAATAACTCTT-GGGATATCTCTTCCATGGATACCAATAGCAACTC 2502089 Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474 |||| || || || || | || ||| ||||| ||| || | | |||| | Sbjct 2502090 TCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATGATC 2502149 Query 156475 GTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 |||| |||||| || || || |||| | |||||||||| ||| |||| Sbjct 2502150 TCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAATCACGGTCATAAACAAT 2502204 Score = 127 bits (140), Expect = 6e-24 Identities = 257/378 (68%), Gaps = 5/378 (1%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 ||||| || ||||||| | ||||||| |||||| || |||||||| ||||| | Sbjct 2806348 CTATCGAATCTACCAGGTCTCAATAATGCTCTGTCTAAAATGTCGGCTCTATTTGTACCA 2806407 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 ||||||||||| | || || | ||| |||||||| || | |||||| Sbjct 2806408 GCCAATACAACGACGTGGTCAGTACTATCAAACCCATCCATTTCAACCAATAGTTGATTC 2806467 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| ||| ||||| ||||| | ||| ||| || ||| | | |||| ||| Sbjct 2806468 AATGTAGTTTCTCTTTCGTCATTAGCTCCTGTTGCATTTCCC---TTGGATCTTTGCTTA 2806524 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| ||||| |||||||||| || | | | | || | ||||| || ||| | Sbjct 2806525 CCAATGGCATCGATTTCGTCAACAAACACAATAGATGGTGCATTTTCCCTTGCAGTCTTG 2806584 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 ||||| || | ||||| || || || | ||||||| ||||||| || ||||| ||| || Sbjct 2806585 AATAAATCACGCACACGTGAGGCACCCACACCAACAAACATTTCAACGAATTCGGAACCG 2806644 Query 289150 GATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 ||||| |||| || | || ||||| || ||| || | || || | |||||| Sbjct 2806645 GATAC-AGAATAAAACGGAACGCCAGCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTT 2806703 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||||||||| || || || Sbjct 2806704 ACCTGTTCCCGGCGGCCC 2806721 >seq3 Length=962442 Score = 89.7 bits (98), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||| |||||||| ||||||||| || |||| ||||| | || | | | || Sbjct 733015 CTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGATTGCTGGGGCCATATCCCTT 733074 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || || ||||| || | |||||| ||||| |||| ||||||| |||| || |||||| Sbjct 733075 GCCGTTTTGAATAAATCACGTACACGCGATGCACCAACACCAACAAACATCTCAACAAAT 733134 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 || || |||| || | || | |||| |||||| || || ||| | |||| Sbjct 733135 TCCGATCCGGAAACACTGAGAAAAGGTACACCTGCTTCACCAGCAGTTGCTTTTGCCAAC 733194 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCC 289227 | ||||||||||| ||||| || ||| Sbjct 733195 AAGGTCTTACCTGTACCAGGAGGCCCC 733221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817430281033