Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 2e-23
seq3 109 4e-19
>seq5
Length=2091826
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| |||||||| || || || || ||||| ||| | || ||| |
Sbjct 2076131 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 2076072
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| | | | | || ||| ||||| || |||||||| | || |||||
Sbjct 2076071 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2076012
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|| ||| | |||| ||| |||||||| |||| || | | ||| || | ||||||||
Sbjct 2076011 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075952
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||||||| || || || |||||| |||||||||||||| |||| ||
Sbjct 2075951 CATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075904
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| |||||||| || || || || ||||| ||| | || || |
Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | | || ||| ||||| || |||||||| | || |||||
Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| |||||||| |||| || | | ||| || | |||||||||
Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||| || || || |||||| |||||||||||||| |||| ||
Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075676
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| |||||||| || || || || ||||| ||| | || || |
Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | | || ||| ||||| || |||||||| | || |||||
Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| |||||||| |||| || | | ||| || | |||||||||
Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||| || || || || ||| |||||||||||||| |||| ||
Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 2075448
>seq3
Length=962442
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||||||||| | || || |||||||| || | ||| ||| |
Sbjct 22340 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 22399
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | | || || ||||| || || ||||| | || |||||
Sbjct 22400 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 22459
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|| ||| | || | ||| |||||||| |||| || | | ||| || | ||||||||
Sbjct 22460 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 22519
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||| |||||||| ||||| |||||| |||||||||||||| |||| ||
Sbjct 22520 CATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876756248201
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |