Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 6e-13 seq4 87.8 2e-12 >seq7 Length=2235583 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCT 50499 |||||||| ||||||||||||||||||||||||||||||||||||||| || | | |||| Sbjct 2179562 TATAATGCCGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAAACAGAAGAAGCT 2179621 Query 50500 ACTGCTGAA 50508 | || ||| Sbjct 2179622 AGAGCCGAA 2179630 >seq4 Length=3023470 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/248 (69%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 193356 GGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGT 193415 || || | ||||||||| | || |||||||| ||| || |||||||| ||| | Sbjct 926787 GGTCCCATTTATTACCAAAAATTGAAGCACATGGTGTTGGACAAGATGCATGCCAGA-GC 926845 Query 193416 CATGGGC--AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAG 193473 | |||| ||| | | || ||| |||| |||| | ||| | || || ||| | Sbjct 926846 AAGGGGCCCAAGGGCCGTGTTGACAA-GACAGCCAACTGAAGGTAGATCCAGAGATGGTG 926904 Query 193474 GTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCA-ATTC 193532 |||||||||| ||||||||||| | ||| ||| || | | |||||||| | || ||| Sbjct 926905 GTTTAAGATTGGGAGAAATGGAGAGAGATTGTGTTATCGCTTATGGTGCTTCCCAGCTTC 926964 Query 193533 TTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGT 193592 || | |||||| || | | | ||| ||| ||||| | || |||||||| | ||||| Sbjct 926965 TTCTA-GAAAGATTGATGATATCTTCAGATGCTTTTGAGGTTGATGTTTGTAACAAATGT 927023 Query 193593 GGTATGAT 193600 || |||| Sbjct 927024 GGGTTGAT 927031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531129290240