Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq4 194 4e-44
seq7 93.3 1e-13
seq1 93.3 1e-13
>seq4
Length=3023470
Score = 194 bits (214), Expect = 4e-44
Identities = 563/861 (65%), Gaps = 7/861 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| ||||| ||||||||| | || | | ||||| | ||| | ||||| | | |
Sbjct 2502174 TACTTTGGATTCAAAACTTTGGAGAGATCATATTTGTTACGTATTAATGGAAAAGTTGCT 2502115
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||| | || |||||| || || | | ||||| |||||||| |||||| ||||| |
Sbjct 2502114 GAAAGACCACAACACTTGATTATGAGAGTTGCTATTGGTATCCATGGAAGAGATATCCCA 2502055
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||||||| ||| || | | | ||| | || ||||| | ||||
Sbjct 2502054 AGAGTTATTGAGACTTACAATTTGATGTCTCAAAGATACTTTACTCATGGTTCTCCATGT 2501995
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| || || || || ||| | |||| || | ||||| |||||| | | ||| ||
Sbjct 2501994 TTGTTCAATGCCGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAATGAA 2501936
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAA 110601
|| ||||||||||||||||||||||| || ||||||| | ||| | ||||| ||||
Sbjct 2501935 AGAAGATTCTATTGAAGGTATTTATGACACT-TTAAAGACATGTGCCTTGATTTCAAAAA 2501877
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
|||| || ||||| | || | || | ||||| || | || || | |||||
Sbjct 2501876 GTGCTGGTGGTATTGGATTGCATATCCACAACATTCGTTCCACTGGTGCCTACATCGCTG 2501817
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || ||| |||||| ||| || |||||||| | | || |||||| |||||||
Sbjct 2501816 GTACCAACGGTACTTCAAATGGTATTATTCCAATGGTTCGTGTTTTCAACAACACTGCTC 2501757
Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| ||||||||||| |||||| || | |||||| | ||||| ||||| |
Sbjct 2501756 GTTATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATATCTTGAACCAT 2501697
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
|||| | ||||| ||||| ||| | ||| || | || || || || |||||| |
Sbjct 2501696 GGCACGCTGATATCTTTGACTTCATTGAAATTAGAAAGAACCATGGTAAGGAAGAAATTA 2501637
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
|||| | || || || || ||||||| ||||||| || |||||| | ||| |
Sbjct 2501636 GAGCTAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTTATGAAAAGAGTTGAGC 2501577
Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958
||||||| ||| | | | | ||| || |||| | ||||| ||||
Sbjct 2501576 AAAATGGTGATTGGACATTGTTCTCTCCAAATGAAGCTCCAAACTTGGCTGATACTTATG 2501517
Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAA 111018
| | || |||| || | || || ||||| || |||||||| | | || ||
Sbjct 2501516 GTGACGAATTTGTTGAGTTGTATGAGAAATACGAGAAAGAAGGTCGTGGTAGAAAGACAA 2501457
Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078
| ||||||| || | |||| ||| | || ||||| ||| ||||| || || |
Sbjct 2501456 TCAAAGCTCAAAAATTGTGGTATTCCATCTTGGAGGCACAAACTGAGACTGGTACCCCAT 2501397
Query 111079 ATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTA 111138
|| ||||| || ||| | ||| ||| || || |||| ||||| || ||||
Sbjct 2501396 TCATGTTGTACAAGGATGCTTGTAACACCAAGTCCAACCAAAAAAATTTGGGTGTTATTA 2501337
Query 111139 AGTCTAGTAATTTGTGCTGTG 111159
| ||| || ||||| ||||
Sbjct 2501336 AATCTTCCAACTTGTGTTGTG 2501316
Score = 152 bits (168), Expect = 1e-31
Identities = 495/753 (66%), Gaps = 23/753 (3%)
Strand=Plus/Plus
Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494
||||| |||| | | || || ||| | ||||| ||||| ||| || | ||||||
Sbjct 2626060 TTTCCTATTAGATACCATGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGG 2626119
Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGG---GAAAAATTAACCTTG 131551
|||| ||||| || ||| | |||||| || |||||||| || ||||| |
Sbjct 2626120 ACTGCAGAAGAAATTGATTTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGAC 2626179
Query 131552 AATGAAAAAGATTTTGTTTCCAAAGTTCTTG-CATTCTTCGCCGGAAGTGATGGCATTGT 131610
||||||| | |||| || || ||||| | || ||||| | |||||| |||||
Sbjct 2626180 AATGAAAG-GTTTTTCATTGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGT 2626238
Query 131611 TATTGAAAATCTTGTTATTAA--TTTCATTCAAGAAATTGATATTCCTGAAGTAACATCG 131668
|| |||||| |||| | || ||| | | ||| || | |||||||||| | |||
Sbjct 2626239 TAATGAAAA-CTTGGTGGAAAACTTTTCTGCT-GAAGTTCAAATTCCTGAAGCCAAATCA 2626296
Query 131669 TTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGATT 131728
|| || || ||| | | ||| |||||| || | |||||||||||||||
Sbjct 2626297 TTTTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATT 2626356
Query 131729 GAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAATTT 131788
|| | | | | || || | | || || ||||| ||||| | | | |
Sbjct 2626357 GAAACTTATATCAAGGATCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATC 2626416
Query 131789 CCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT-AA 131847
||| |||||||||||| || || ||||| || | |||||||||| ||||||| | |
Sbjct 2626417 CCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCAA---GATTCCGATGCA 2626473
Query 131848 T--TTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905
| ||| || ||| | || ||||||||| |||||| ||||| | |||||| |||
Sbjct 2626474 TTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCT--TTTTCA-GTGGA 2626530
Query 131906 TTCTGTGCT---ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCC 131962
| | |||| || || ||| | |||||| | ||||| ||||| ||| | | || |||
Sbjct 2626531 TCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCC 2626590
Query 131963 AATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGA 132022
||| |||| || | | ||||||| || || ||||| ||||| || | | | |
Sbjct 2626591 AATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGC-ATGCTTGTTGTTTGC 2626649
Query 132023 AAATTTGC-TGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGA 132081
|||| | ||| || ||| ||| | | || || | |||| | |||||||||||
Sbjct 2626650 TCATTTACAACATAGACCTGACCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGA 2626709
Query 132082 TATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGCTGA 132141
|| || || || || |||| || || ||||| | |||| | || |||||| | |
Sbjct 2626710 AATTGAAAAAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAA 2626769
Query 132142 CTCTATGAAGGAGTACATTGAATTCGTTGCTGA 132174
| ||| | || ||||||| ||||| ||
Sbjct 2626770 GTTGATGTGTCAATATGTTGAATTTGTTGCCGA 2626802
Score = 120 bits (132), Expect = 7e-22
Identities = 141/184 (77%), Gaps = 10/184 (5%)
Strand=Plus/Minus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||||| ||| ||||| || ||||||| | ||||||||| ||||||||||||||
Sbjct 19083 CATTTGATGGACGATGATCCAGTCTTGTTCAACCGTCAACCATCATTGCATAAAATGTCT 19024
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAA--TGTAAG 305424
|||||||| || | ||| || | |||| | ||| ||||| ||||||| ||| ||
Sbjct 19023 ATGATGGCGCACAGAGTGAAGG--TTATGCCATATTCTACATTCAGATTAAACTTGTCAG 18966
Query 305425 T-GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483
| ||| | || |||||||| ||||| ||||| || |||||||| ||||||||||||
Sbjct 18965 TAACTT---CACCGTATAATGCCGATTTCGATGGTGACGAAATGAACTTGCATGTACCTC 18909
Query 305484 AATC 305487
||||
Sbjct 18908 AATC 18905
>seq7
Length=2235583
Score = 93.3 bits (102), Expect = 1e-13
Identities = 117/156 (75%), Gaps = 6/156 (4%)
Strand=Plus/Plus
Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395
|||||| | || || ||| |||||| | | || || |||| ||| | | |||||| |
Sbjct 2179460 TTCAATCGTCAGCCTTCATTGCATAGATTATCCATTTTGGCGCATTATGCCAAAGT-TCG 2179518
Query 305396 TC--TGGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTT 305452
|| |||| || |||| |||| |||| ||| || || ||||||||||| ||||||
Sbjct 2179519 TCCTTGGA--GAACTTTCAGATTGAATGAGTGTGTATGCACACCTTATAATGCCGATTTT 2179576
Query 305453 GATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488
||||| |||||||||||| | ||||| |||||| ||
Sbjct 2179577 GATGGGGATGAAATGAATTTACATGTTCCTCAAACA 2179612
>seq1
Length=957321
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 167248 CACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTAC 167307
||||||||||||| || ||| |||||| || |||||||||| ||||| |||| ||
Sbjct 381513 CACCAGCATTATCAAACTCACCACAATAATTGGGAGCTGAAAATAATGTAACCAATTGAC 381454
Query 167308 GATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353
| || || |||||||| |||||||||||||||| ||| |||||
Sbjct 381453 GTTTACTGAAAAATTCATATCCATCTTCAACAACTTGATGAGCACG 381408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812663145649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |