Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 3e-26
seq3 114 8e-21
>seq5
Length=2091826
Score = 132 bits (146), Expect = 3e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| |||| ||| |||||||| |||||||| |||||
Sbjct 2075447 ACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075506
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || ||||||||||| || ||||||||||| | || |||||| | ||
Sbjct 2075507 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075566
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| || || | || |||| ||| | ||||| |||||| |
Sbjct 2075567 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACATTGTCAATAGTGTCTGATGATTCAA 2075625
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || ||||| || || || ||||||
Sbjct 2075626 CCTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCATA 2075675
Score = 129 bits (142), Expect = 4e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || | ||| |||||||| |||||||| |||||
Sbjct 2075675 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075734
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || ||||||||||| || ||||||||||| | || |||||| | ||
Sbjct 2075735 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075794
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| || || | || |||| ||| | ||||| |||||| |
Sbjct 2075795 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACATTGTCAATAGTGTCTGATGATTCAA 2075853
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || ||||| || || || ||||||
Sbjct 2075854 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATA 2075903
Score = 118 bits (130), Expect = 7e-22
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || | ||| |||||||| |||||||| |||||
Sbjct 2075903 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 2075962
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || ||||||||||| || ||||||||||| | || |||||| | ||
Sbjct 2075963 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2076022
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| || || | || || | ||| | ||||| ||| || |
Sbjct 2076023 AATACCTTCTTTGTCTTGGATCTT-GGATTTGACGTTGTCAATAGTGTCTGATGACTCAA 2076081
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| || | ||||| || ||||| || || ||||| || || || ||||| ||
Sbjct 2076082 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGT 2076133
>seq3
Length=962442
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | |||||||| || | ||| || ||||| |||||||| ||||
Sbjct 22569 CACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGG 22510
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || ||||||||||| || ||||| ||||| | || |||||| | |
Sbjct 22509 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 22450
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||| ||||| || || | | |||| ||| | |||||| ||| ||
Sbjct 22449 GGATTCCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATGGTGTCAGATGACTCA 22391
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| |||||||| || | ||||| |||||||| |||||
Sbjct 22390 ACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 22341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703963945280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |