Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 123 6e-23 seq5 89.7 1e-12 >seq3 Length=962442 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| || || || ||||| |||||||| ||||| || |||||| Sbjct 22344 CAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCTGAC 22403 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || |||||||| || || ||| Sbjct 22404 ACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 22463 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || || || ||||||||||| || |||||| |||| |||||| || Sbjct 22464 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 22523 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||||| | ||| | || |||||| Sbjct 22524 CAAAAGGAATCTACTTTGCACTTGGTGTTGAGA 22556 >seq5 Length=2091826 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| || || || ||| || ||||| | || Sbjct 2075660 CAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2075601 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||| ||||| |||||||| ||| || || |||||| | || || Sbjct 2075600 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2075541 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| |||| |||||| | || ||||| || Sbjct 2075540 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2075481 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || | ||| | || |||||| Sbjct 2075480 CACATTACACTTGGTGTTGAGA 2075459 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| || || || ||| || ||||| | || Sbjct 2075888 CAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCAGACACTATTGACAA 2075829 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||| ||||| |||||||| ||| || || |||||| | || || Sbjct 2075828 TGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTT 2075769 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| |||| |||||| | || ||||| || Sbjct 2075768 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATC 2075709 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || | ||| | || |||||| Sbjct 2075708 CACATTGCACTTGGTGTTGAGA 2075687 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| || || |||||| | || || || || || Sbjct 2076046 AAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 2075987 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| | || ||||| || || | ||| Sbjct 2075986 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATTCAAAAAGAATCCACATTGCAC 2075927 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 2075926 TTGGTGTTGAGA 2075915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820663721289