Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 6e-24
seq3 89.7 5e-13
>seq5
Length=2091826
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || |||||||| ||||| || | ||||| | || || ||| |
Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || || || ||||| ||||| || || |||||
Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | |||| | || |||||| | ||||||| ||||| | | ||| |||||
Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||||||||||||||| | || || ||||| ||||||||||| ||
Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075676
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || |||||||| ||||| || | ||||| | || || || | || |
Sbjct 2076130 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGA-GTCATC 2076072
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| ||||| || | || ||| || || || ||||| ||||| || || |||||
Sbjct 2076071 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2076012
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||||| | |||| | || |||||| | ||||||| ||||| | | ||| |||||
Sbjct 2076011 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075952
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||||||||||||||| | || || ||||| ||||||||||| ||
Sbjct 2075951 CATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075904
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || |||||||| || || || | ||||| | || || ||| |
Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || || || ||||| ||||| || || |||||
Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | |||| | || |||||| | ||||||| ||||| | | ||| |||||
Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||||||||||||||| | || || ||||| ||||||||||| ||
Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 2075448
>seq3
Length=962442
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| | || || ||| | ||||| | ||||| || | || |
Sbjct 22341 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGA-GTCATC 22399
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || || || || || || || || || || || |||||
Sbjct 22400 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 22459
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||||| | || | | || |||||| | ||||||| ||||| | | ||| |||||
Sbjct 22460 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 22519
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| ||||| || | || || ||||| ||||||||||| ||
Sbjct 22520 CATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094349926880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |