Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 2e-30
seq3 118 1e-21
seq4 82.4 8e-11
>seq5
Length=2091826
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||||| |||||||| |||||||||||||||||| |
Sbjct 2075448 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075507
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||||||||| | || ||||| || ||
Sbjct 2075508 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075566
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || |||||| ||| | ||||| || ||||| ||
Sbjct 2075567 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2075626
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 2075627 CTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | |||||||| |||||||||||||||||| |
Sbjct 2075676 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075735
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||||||||| | || ||||| || ||
Sbjct 2075736 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2075794
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || |||||| ||| | ||||| || ||||| ||
Sbjct 2075795 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 2075854
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| |||||||| || ||||| ||||||||||||||
Sbjct 2075855 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 147 bits (162), Expect = 2e-30
Identities = 178/240 (74%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | |||||||| |||||||||||||||||| |
Sbjct 2075904 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075963
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||||||||| | || ||||| || ||
Sbjct 2075964 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 2076022
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || |||||| ||| | ||||| || || || ||
Sbjct 2076023 AATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAAC 2076082
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725
|| | || ||||| |||||||| || ||||| ||||||||||||||| || || |||
Sbjct 2076083 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTGACTTGGTT 2076142
>seq3
Length=962442
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | || ||||||||||| |||||||||||| |
Sbjct 22567 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22508
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||| ||||| | || ||||| || ||
Sbjct 22507 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGG 22449
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | ||||| || || || ||
Sbjct 22448 GATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAAC 22389
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| | ||| ||||||||||| || | ||||| || || |||||||||
Sbjct 22388 TTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340
>seq4
Length=3023470
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 8758 TTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAA 8817
|||||||||||| ||||||| | ||| || |||||| ||||| || ||||||
Sbjct 2500902 TTGCAATACGACTTGTGGAACAGAAAGCCAACTGAATTGTGGGATTGGGATGAATTGAAA 2500843
Query 8818 CGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCC 8877
|| |||| || |||| || | || || ||||||||||| ||||| || ||
Sbjct 2500842 GAAAAGCTTGCCAAACACGGTATGAGAAACTCCTTGTTGGTGGCTCCAATGCCTACTGCT 2500783
Query 8878 ACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
| || | ||||| |||| ||||| |||| || ||||| | ||| || | |||
Sbjct 2500782 TCTACATCACAAATTTTGGGTAACAATGAATGTTTCGAGCCATACACTTCAAATATTTAC 2500723
Query 8938 GTGAGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATC 8977
||| |||||||||| || || ||| ||| | ||||
Sbjct 2500722 TCTAGAAGAGTGTTGGCTGGTGAGTTTCAAATTGTTAATC 2500683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398343142680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |