Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 361 8e-95 >seq4 Length=3023470 Score = 361 bits (400), Expect = 8e-95 Identities = 1190/1838 (65%), Gaps = 29/1838 (2%) Strand=Plus/Plus Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472 ||||||||||| || || | ||| ||||||| || || ||||| ||||| | ||| Sbjct 2500385 TAGTACATACCTGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTA 2500444 Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532 ||||||| || ||||| || | ||||| ||| |||||||| || || Sbjct 2500445 CCCATGGTTGGATCTTTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCT 2500504 Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592 ||||| | ||||| | ||||| |||||| | |||||||||| ||| || | | Sbjct 2500505 CTATCAGAAGCCATATCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAAT 2500564 Query 68593 TGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATT 68649 ||||| || ||||||| | | | | ||||||||| ||| | || ||||| Sbjct 2500565 GCCTTGATTTCGTCTGGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATG 2500624 Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGA 68709 || |||| || | |||||||| | | | || ||| || | | | | ||| Sbjct 2500625 CTACTCTTCATAGCGTCATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGA 2500684 Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 ||||| |||||||| || |||| |||||||| | || ||||||||| || ||||| Sbjct 2500685 TTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGC 2500744 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | | ||||||| || |||| |||||| | || || ||||| ||||| || |||||| Sbjct 2500745 TCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACC 2500804 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 || || ||||| | ||| ||| | | || ||||| | | | ||||||||| Sbjct 2500805 AACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCAC 2500864 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 | |||| ||| ||||| | |||||||| | | || | ||| ||| Sbjct 2500865 AATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTGAG 2500924 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || | || |||||||| || ||||| | | |||| |||| ||| || | ||| Sbjct 2500925 CCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCA 2500984 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 | | ||| |||||||| ||||| | |||| | || |||||| | ||| ||| Sbjct 2500985 GCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAAT 2501044 Query 69070 G-GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 ||| | |||| ||||||||||| ||||| || || || || | | || ||||| Sbjct 2501045 CCGATTCTC-AAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCT 2501103 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 |||||| | ||||| || |||||||| |||| || || || || ||| || | | | Sbjct 2501104 GTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCT 2501163 Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATC 69244 ||| | ||| || || ||||| ||||| | | ||| ||| | | || | Sbjct 2501164 ATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGC 2501223 Query 69245 GT-----CCATC---TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296 | ||||| || ||| | | || | || || | |||||||| || Sbjct 2501224 ATGCTTACCATCCTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGC 2501283 Query 69297 TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356 || |||| | | ||||| | || || ||| | || | |||| ||| Sbjct 2501284 AACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAAC 2501343 Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416 |||| ||||| || || ||| ||||||| || |||||||| | || || || || Sbjct 2501344 ACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGT 2501403 Query 69417 ACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGT 69476 |||||| ||| | || | || | || || | ||| | ||| || ||| || Sbjct 2501404 ACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATT---GT 2501460 Query 69477 C-TTGTA--ACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCA 69533 | || || ||| ||||| || |||| ||| | | | ||||| || || | Sbjct 2501461 CTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATA 2501520 Query 69534 AACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT 69593 | |||| |||| ||| |||||||||| | | ||||| ||| || ||| | || Sbjct 2501521 AGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTC 2501580 Query 69594 AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT 69653 ||||| ||||||||| | ||| || ||||| | |||| || | ||||| | |||| | Sbjct 2501581 AACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAAT 2501640 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 |||||| || || || ||| ||| || | || || | ||||||| |||||||| Sbjct 2501641 TTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGG 2501700 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 ||| ||||||| || | | || |||| || || || || ||||| | || | || Sbjct 2501701 TTCAAGATATAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGC 2501760 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 |||||| || | || | | ||| |||||||||||||| || |||| || || |||| Sbjct 2501761 AGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGC 2501820 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 || || || | | ||||| || ||| | || || || || || |||| Sbjct 2501821 GATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTT 2501880 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA- 69952 || || | ||||| || || |||||||| ||||| || || ||| ||| ||| Sbjct 2501881 TGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCAT 2501940 Query 69953 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAG 70012 || | |||||| || | |||||||| | | | ||| || ||||| || || | Sbjct 2501941 TGCAACCAAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATG 2501999 Query 70013 GAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072 |||| | ||||| || || ||| ||| | || |||||| || |||||| || | | Sbjct 2502000 GAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGA 2502059 Query 70073 TATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCG 70132 |||| | ||| || || || || || | ||| | || || || |||| ||| | Sbjct 2502060 TATCTCTTCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAA 2502119 Query 70133 TTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGT 70192 ||| ||| || |||| |||||| | |||| |||||| || ||||| || |||| Sbjct 2502120 CTTTTCCATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGT 2502179 Query 70193 A--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228 | ||||| || | || |||| ||| | || |||| Sbjct 2502180 AGTTGAAA--TCACGGTCATAAACAATTGCTGAGTTTA 2502215 Score = 315 bits (348), Expect = 1e-80 Identities = 607/885 (69%), Gaps = 24/885 (3%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | ||| || || ||||| || || || |||| || ||||| Sbjct 2626928 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2626869 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442 ||||| |||||||| ||||| || |||| || |||||| ||| || || | Sbjct 2626868 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTAC--CCAAAGCAACCA 2626811 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 || ||||| || ||||||||||| | ||| ||||| | |||||||||||| | Sbjct 2626810 AT-AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2626752 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | ||||||| | || || || | || |||||||| || || || || || || || Sbjct 2626751 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2626692 Query 39563 ATCGATGTTACTACCTCATCACTCGGT--GG---ATGCAATAAATGTTTAAACATTAAGC 39617 || | || | || ||| | ||| || ||| |||||| ||||| |||| Sbjct 2626691 AT---TCTTTCAACA--ATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGC 2626637 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 | || || ||| |||| || ||||| | || ||| ||||| || ||||| || | || Sbjct 2626636 ATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATC 2626577 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737 | ||||||| || | ||| || | ||| || |||| |||||| |||||| || |||| Sbjct 2626576 CTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGA 2626517 Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTA 39794 | || || || || ||||| ||||| | |||||| | | || ||| || || | Sbjct 2626516 TACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAA 2626457 Query 39795 TCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 |||| || || ||||||||||| ||||| || | ||| || ||||| |||||||| Sbjct 2626456 TCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTG 2626398 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || | ||| ||| | ||| || | ||| || || || || | ||| || Sbjct 2626397 AATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTT 2626338 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 |||||||| |||||||| ||| || || || || ||||| || | ||||||| |||| Sbjct 2626337 TCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATT 2626278 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | | |||| ||||| |||| |||||||| || || |||||| || || Sbjct 2626277 TGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCG 2626218 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTAT---TCCAG 40090 ||||| ||||| | | ||| ||| | |||||| | ||||||| | |||| Sbjct 2626217 AAAAAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAA 2626158 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 |||| | |||||| || ||| | |||||| || ||||| || || || || ||||| Sbjct 2626157 TCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTC 2626098 Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195 |||||||| | ||| || ||| | ||| || ||||| || ||| Sbjct 2626097 TTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626053 Score = 113 bits (124), Expect = 6e-20 Identities = 517/803 (64%), Gaps = 19/803 (2%) Strand=Plus/Minus Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421 |||||||| | || || || |||| | | || | || ||| |||| || ||||| Sbjct 921803 TCCTTATCAACAGTGAATTGGATGGCTCTCGCAGCAGCTTGTGTTCGTAAGTAATACATG 921744 Query 68422 CCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTT 68481 || ||||||| |||| ||| | | ||||| || || ||||| || Sbjct 921743 CCCGTTTTCAAACCTTTTTCCCAGGCATGAAAATGACAGCTGGTGAGTTTACCTATGGTT 921684 Query 68482 GGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGC 68540 |||| | || |||| ||||||||| ||| ||| |||||||| |||||||||||| Sbjct 921683 GGATTCAGC-ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCTCTATCTGC 921625 Query 68541 CGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600 ||||| | ||| ||| |||||| | ||||||| || ||| | | | || Sbjct 921624 AGCCATATCTATGATATCCTTTTGTTTCAACTCCCAAACTGTTCGGTAAAGTTTTCTAAT 921565 Query 68601 ATCATCTGG-AAGGCTCG--TATTTTGAATGGATCCACCATCGGATATAATTAT-ATTCT 68656 ||| | || | || | ||||||| || ||||||||||| || ||| | | || Sbjct 921564 ATCCCCAGGTATCACTGGTATATTTTGGATTGATCCACCATCTTGAATGATTTTGCTCCT 921505 Query 68657 TGAT-CTCATCATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAAC 68714 | || || | |||||| |||| | ||| ||| | || | ||||| | || || Sbjct 921504 TAATGCTGA--ATTCCA-AATTCCCAAATCCACCAAATCCCTTATGAGATACTTGTTCAC 921448 Query 68715 TATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 68774 | ||||||||| || |||| ||||| |||||| || | || ||| |||||||| | Sbjct 921447 CACTTGAAATTCGCCTGATATCACTCGACGAGTATACAAGTTGGAGGTGTATGGTTCGAA 921388 Query 68775 AGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAA 68834 | | ||||| || | ||||||| ||||| ||||| ||||| || || || || | Sbjct 921387 ACACTCATTGAACCCTAAGATTTGAGATGTTGAAGCAGTAGGCATGGGAGCTACTAAAAG 921328 Query 68835 ACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC-CCAAAGA- 68892 ||||| | ||||| | | | |||||||||| || | ||| || || ||| Sbjct 921327 TGAGTTTCTCAACCCATGACTCCTCACATTATCTTTTAACTGATCCCAGTCATCATAGAA 921268 Query 68893 -TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCC 68951 || |||| |||||| | ||| |||| | ||| | | || ||||| Sbjct 921267 TTC---TGGTTTTTGATTCCACATATCAAATTGCAAAATGTCTTGCGAAGCTGGAGATCC 921211 Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACC 69011 | | | ||| ||||| || || || || || |||| ||||||| ||| | Sbjct 921210 AGCAAAGGTTGAGTAAGGACCCTCAAGTATAGATAATTCAAGTGAGGCCTCTACAGCAGC 921151 Query 69012 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG 69071 | ||| || ||||| || || | | |||||| | || || |||||| || ||||| Sbjct 921150 ATGATAGATGGTTTCAAAGATTTGCGAATTGAGTTTTTTAGCCTCTAGAGAGTCAAATGG 921091 Query 69072 ATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130 ||| | || | |||| ||| || | || || || || ||| | || |||| || Sbjct 921090 -TAACCTCAATTCGAGAAATAAATCAGCTAGACCTTGTACGCCTATAGCTATTGGTCGAT 921032 Query 69131 GTCTCTTATTTGAACTTTCAGCT 69153 | || ||||| ||||| ||| Sbjct 921031 TCTTTTTGTTTGATCTTTCCGCT 921009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908722722760