Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq4 262 3e-65
>seq4
Length=3023470
Score = 262 bits (290), Expect = 3e-65
Identities = 594/878 (68%), Gaps = 35/878 (4%)
Strand=Plus/Plus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| ||||||| ||| ||| ||||| || |||||||||||||| || || | || ||
Sbjct 2626053 TGTCATGTTTCCTATTAGATACCATGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATC 2626112
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGC--AT 43817
||| ||||| ||||||||| ||||||| |||||| ||| || |||||| | |
Sbjct 2626113 ATTCTGGACTGCAGAAGAAATTGATTTAGGTAAAGATCTT--CATGATTGGAGAGAGAAA 2626170
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGG-----TTTTGGCGTTTTTTGCTGCGAG 43872
| || |||| ||| |||| | |||| | ||||| ||||| |||||
Sbjct 2626171 TTGAATGACAATGAAAGGTTTTT----CATTGGAAGAATCTTGGCCTTTTTCGCTGCCTC 2626226
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932
|| || || || |||||||| ||||| ||| | ||||||||| | || ||
Sbjct 2626227 TGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCTGCTGAAGTTCAAATTCCTGA 2626286
Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA--C 43990
||| || |||||||| || ||||| || ||||| |||||||| |||| || |
Sbjct 2626287 AGCCAAATCATTTTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACTTATTC 2626346
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATG 44048
| | || ||| || || || ||||| ||| || ||||| || || || ||||
Sbjct 2626347 ATTATT--GATTGAAACTTATATCAAGGATC--CAAAGGAAGCCGATTTCTTATTCAATG 2626402
Query 44049 CGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AA 44105
| || ||||| | ||| |||||| | || || || |||||| | | |||||| |
Sbjct 2626403 CTATTGAAACCATCCCTCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATTCAAG 2626462
Query 44106 ATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCT 44165
|||| ||| | |||| || || | || || ||||| | ||| || || || ||
Sbjct 2626463 ATTCCGATGCATTGTTTGCTGAGAGATTGGTTGCTTTTGCTGCTGTTGAGGGTATCTT-- 2626520
Query 44166 TTTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
|||||| |||||||||| |||| || ||||| ||||| |||| || ||||| || ||
Sbjct 2626521 TTTCAGTGGATCGTTTGCTTCCATTTTCTGGTTGAAGAAGAGAGGATTAATGCCAGGATT 2626580
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
||| ||||| ||||| || || ||||||||||||| ||||| |||||||| |||||
Sbjct 2626581 GACCTTTTCCAATGAATTGATTTGTCGTGATGAAGGTTTACACACTGATTTTGCATGCTT 2626640
Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATT-ACAGATATTGTTG 44342
||| ||| || | | | ||| ||| |||| || | ||| ||| ||
Sbjct 2626641 GTTGTTTGCTCATTT---ACAACATAGACCTGACCCAAAGATTGTTGAAAGA-ATTATTA 2626696
Query 44343 TAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAG 44402
|| ||||| | || ||| ||||||| | || ||||| || || | ||| | |
Sbjct 2626697 CTGAAGCAGTTGAAATTGAAAAAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGG 2626756
Query 44403 GAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGG 44462
|||||||| |||||| |||||| |||||| |||| || | ||| | | |
Sbjct 2626757 GAATGAATTGTAAGTTGATGTGTCAATATGTTGAATTTGTTGCCGACAGATTATTGGTTG 2626816
Query 44463 AACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTT 44522
||||| | | ||| || | ||| || || |||||||||||||| ||||| |
Sbjct 2626817 CTTTGGGTAACAAAAAAGTTTACAATGTCACCAATCCATTTGATTTTATGGAGAATATCT 2626876
Query 44523 CGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTT 44560
| |||| || || || || || ||||||||| | |||
Sbjct 2626877 CCTTGGCTGGTAAGACCAATTTCTTTGAAAAAAGAGTT 2626914
Score = 156 bits (172), Expect = 3e-33
Identities = 303/445 (68%), Gaps = 12/445 (3%)
Strand=Plus/Minus
Query 19430 CCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| ||||| ||||| || ||||| || | |||||| || ||| || |||||||||
Sbjct 534428 CCAAAGATTGTTAATGGACCCGAAATGTTGAGTAAATACGTTGGTGCGTCTGAAGAAAAT 534369
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGG-GCGCAAAAGTTC 19547
| || |||||| |||||||||| ||| | |||| | ||| | | | | |
Sbjct 534368 ATTCGTAATTTGTTCAAGGACGCTGAAGCTGAATATAAACTTAAAGGTGAGGACTCGGAC 534309
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--- 19604
|| |||| |||| || | |||||||| || | | | ||| || |||||||||||
Sbjct 534308 TT-GCACGTTATTATTTTTGATGAATTAGATTCCGTTTTTAAACAGAGAGGTTCTGGAAA 534250
Query 19605 ------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
| || || || ||||| |||||| |||||| | ||||||| | || ||
Sbjct 534249 GAGTGACGGAACAGGGGTTGGTGACAATGTTGTGAATCAATTGTTGTCAAAGATGGATGG 534190
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| | || |||| |||||| | || ||||| ||||| |||||||| || || || ||
Sbjct 534189 TGTTGATCAGTTGAACAATATTCTTGTCATTGGTATGACCAATAGACTCGACTTGATTGA 534130
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
| || || || |||| ||| | || ||||| |||| || ||| ||||| |||||
Sbjct 534129 TACTGCATTGTTGAGACCTGGTAGATTTGAAATTCAGATTGAGATTGCTTTACCAGATGA 534070
Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTT 19838
| || | ||| || || | ||||||||| || || || ||||| | | ||
Sbjct 534069 AAAAGGTAGAAAGGATATCTTTATGATACATACAAAAAAGTTGAGAGAAAATGGCTTGTT 534010
Query 19839 AAATGACGATGTAGATCTAGAAGAA 19863
|| | | ||||| |||| || |||
Sbjct 534009 AACTAAGGATGTCAATCTTGATGAA 533985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455956404045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |