Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 159 4e-34 seq3 84.2 3e-11 >seq4 Length=3023470 Score = 159 bits (176), Expect = 4e-34 Identities = 457/700 (65%), Gaps = 16/700 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | ||||||||||| || || |||||||||||||| ||||| | ||| || Sbjct 2500724 TAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAA 2500783 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || |||| | | | ||| | | ||| | || || ||| Sbjct 2500784 GCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCT 2500843 Query 118302 TTGAGAGCGTCCCAGTCGTAG--TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359 || | | ||||| || | || || ||| || | | ||||| || | || | Sbjct 2500844 TTCAATTCATCCCAATCCCACAATTCAG--TTGGCTTTCTGTTCCACAAGTCGTATTGCA 2500901 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 | |||||| || ||||| || || | | || ||||| || || || || |||| | Sbjct 2500902 ACAAACCTTGCGATGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTA 2500961 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 |||| || || | || || ||||| |||||||||||||| || ||||| | Sbjct 2500962 ATTCAATTGATGCTTCAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATT 2501021 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 || | || || | ||||||||| ||| || | | |||||| |||| || | |||| Sbjct 2501022 CCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTT 2501081 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGAT 118599 ||||||| | | ||||||| | |||||||| || || || ||| || || | Sbjct 2501082 GGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAACTGGGT 2501141 Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659 | | || | ||| || || ||||| | ||| || ||||| || |||| ||||| | Sbjct 2501142 AGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCA 2501201 Query 118660 GCTTTTC---GT------AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710 ||| || || || || | | | || ||| | | | | ||| | | Sbjct 2501202 ACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGA---AGGTAAAG 2501258 Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770 | || || |||| ||||| |||| ||||| | | || || | |||||| Sbjct 2501259 CAATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCAC 2501318 Query 118771 TGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 118830 |||||||| ||| ||||| ||||| || ||||| || ||||| |||||||| | Sbjct 2501319 AACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAG 2501378 Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 |||||||||| | |||| |||| || || ||||| ||||| Sbjct 2501379 CATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTG 2501418 Score = 84.2 bits (92), Expect = 3e-11 Identities = 364/564 (65%), Gaps = 29/564 (5%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||| || ||||| | || | |||||| || ||| || ||| Sbjct 2626634 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2626575 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | || | |||||||||||||||||| | | ||| || ||| ||| ||||| Sbjct 2626574 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2626515 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA----GGAGCGGGACTTTGTATC 130191 ||||| ||| || || |||| | | ||||||||| | | ||| | ||| Sbjct 2626514 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTG---- 2626459 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 || ||| | || ||||| | ||||| || | || |||| ||| | || || || Sbjct 2626458 AATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATT 2626399 Query 130251 CA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 130306 | |||| || |||| || |||||| ||||| || | || || | | |||| Sbjct 2626398 GAATAAGAAATCGGCTTCCTT-----TGGATCCTTGATATAAGTTTCAATCAATAATGAA 2626344 Query 130307 TATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 130365 || ||||| ||| | ||| ||| ||| || || | || || || ||||| Sbjct 2626343 TAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAAC-CATAAAATGATTTGGCTTC 2626285 Query 130366 GCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 130425 || || || ||| | | ||| || | | || ||| |||||| ||||| || Sbjct 2626284 AGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGA 2626225 Query 130426 CCCAGCAAAAAACGCCAGGATATACTT--TATGAATTTCTGTTCATTCTCGTTCAGGGTC 130483 |||| ||||| |||| | || ||| ||||| | |||||| || |||| || Sbjct 2626224 GGCAGCGAAAAAGGCCA--AGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTC 2626167 Query 130484 T---TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCAT 130539 | |||| || | |||||| || | ||| | || || |||||||| | || | Sbjct 2626166 TCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGAT-GC 2626108 Query 130540 TTGAGCCTTCTTATAGAGTTCCCA 130563 || ||||||||| || | || ||| Sbjct 2626107 TTCAGCCTTCTTGTACATTTGCCA 2626084 >seq3 Length=962442 Score = 84.2 bits (92), Expect = 3e-11 Identities = 212/320 (66%), Gaps = 2/320 (1%) Strand=Plus/Plus Query 14148 TATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG 14207 ||||||| || ||||| ||| ||| | |||||| | ||| | ||| || |||||||| Sbjct 732935 TATCAAACCCGTCCATTTCAACCAATAATTGATTCAAGGTGTTTTCACGCTCATCATTGC 732994 Query 14208 CAGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGA 14267 || ||||| ||| || | || ||||| | || ||||| ||||| | |||| || Sbjct 732995 CACCCATACGACCATTACCTCTTTCTTTACCAATAGCATCAATCTCATCAACAAAAATGA 733054 Query 14268 TACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327 | ||| | || | || || || | ||| || || | | ||||| |||| Sbjct 733055 TTGCTGGGGCCATATCCCTTGCCGTTTTGAATAAATCACGTACACGCGATGCACCAACAC 733114 Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGG-AACATTGGATGAAGGGGACGTTAGATTCA 14386 | ||||||||||| ||||| | | ||| |||| | || || || || | |||| Sbjct 733115 CAACAAACATCTCAACAAATTCCGATCCGGAAACACT-GAGAAAAGGTACACCTGCTTCA 733173 Query 14387 CCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCA 14446 || || | ||| || | | |||||| || || || || ||| | | || ||| Sbjct 733174 CCAGCAGTTGCTTTTGCCAACAAGGTCTTACCTGTACCAGGAGGCCCCGACAAAATTGCA 733233 Query 14447 CCACGTGGGATCCTGGCACC 14466 ||||| |||||| ||||||| Sbjct 733234 CCACGAGGGATCTTGGCACC 733253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435130426040