Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 2e-26
seq4 132 5e-26
seq5 100 3e-16
>seq3
Length=962442
Score = 134 bits (148), Expect = 2e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||||||||| || ||||| || || || || ||| | || |||||||||
Sbjct 22340 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 22399
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| | ||| | || || || |||||||| ||||| || ||||| ||
Sbjct 22400 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 22459
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 22460 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 22519
Query 27585 TGTCCAAAAGGAATCCACT 27603
||||||||||||| |||
Sbjct 22520 CATCCAAAAGGAATCTACT 22538
>seq4
Length=3023470
Score = 132 bits (146), Expect = 5e-26
Identities = 662/1043 (63%), Gaps = 35/1043 (3%)
Strand=Plus/Plus
Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784
||||||| ||| || || || | ||| || || | ||| | | |||| |||| ||| ||
Sbjct 2501069 TCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCT 2501128
Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844
|| |||| |||||| |||| ||| ||||| | |||| || |||||||||||
Sbjct 2501129 TCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTG 2501188
Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTC------ACAAAT 80892
|| || ||||| | || | ||||| | | || || || | | | |||
Sbjct 2501189 GTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAA 2501248
Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951
| || || || | || |||| || || || || || || || | | | | | ||
Sbjct 2501249 GAAGGTAAAGCA-ATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTC 2501307
Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011
|| ||||| ||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct 2501308 AACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTT 2501367
Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071
|| ||| ||||| |||||||| ||||| | |||||||| ||||| |||| || |
Sbjct 2501368 GGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAA 2501427
Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131
||||| | ||| | | | || |||| ||| | ||||| | | ||
Sbjct 2501428 GATGGAATACCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGACCTTCTTTCTCGTA 2501487
Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGT 81190
|| | || || | || | | |||| | |||| |||| | || ||| || |
Sbjct 2501488 TTTCTCATACAACTCAACAAATTCGTCACCAT-AAGTATCAGCCAAGTTTGGAGCTTCAT 2501546
Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250
| || | | || ||| || | | ||| || ||||| || || ||||
Sbjct 2501547 TTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGA 2501606
Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTGGTTGAGGCG 81308
|||| | || | ||||| ||| | ||| | | | || | ||| ||||| |
Sbjct 2501607 TCCACAAAGCTGGGAACAAGTCTCT--AGCTCTAATTTCTTCCTTACCATGGTTCTTTCT 2501664
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368
| || | ||||| | ||| || || |||||||| || ||||| | || | | ||
Sbjct 2501665 AATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACC 2501724
Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
|||| || |||| || | || ||||| ||||| ||| || ||||| |
Sbjct 2501725 TGGTCTCTTGTTAC---CACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAAC 2501781
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||||| ||| |||||| ||||| |||| | || ||| ||
Sbjct 2501782 CATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACG 2501841
Query 81483 CACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || || || || ||||| | | ||||||||| ||||| |
Sbjct 2501842 AATGTTGTGGATATGCAAT-CCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCT 2501900
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
| | || |||||||| || || || ||||| |||||| ||| ||||||||| ||
Sbjct 2501901 TTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATG 2501960
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || |||| ||| ||||||||||||| ||| | | ||| | || ||
Sbjct 2501961 ACATTTGTGG--TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTA 2502018
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| | ||||||| | || || || | || | ||| ||||| || || |||||
Sbjct 2502019 TCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGGATACC 2502078
Query 81720 GATAGCTACACGCATAAACATGT 81742
||||| || | ||||| || ||
Sbjct 2502079 AATAGCAACTCTCATAATCAAGT 2502101
>seq5
Length=2091826
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || ||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 2076131 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 2076072
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| || | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2076071 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 2076012
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2076011 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 2075952
Query 27585 TGTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2075951 CATTCAAAAAGAATCCAC 2075934
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || || | |||||||| |||
Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2075722 ATTCAAAAAGAATCCAC 2075706
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | || || ||||| || || | |||||||| |||
Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || | || || || ||||| || || ||||| ||||| ||
Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||| ||||||||
Sbjct 2075494 ATTCAAAAAGAATCCAC 2075478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310335840080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |