Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq5 165 2e-35
seq3 152 1e-31
seq7 100 7e-16
>seq5
Length=2091826
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | |||||||||||||| | ||||| |||| ||||||||| ||
Sbjct 2075459 TCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACC 2075518
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| || || | || |||||| || || ||||||||||| ||
Sbjct 2075519 ATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 2075578
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || ||| || || |||||||| | ||| || ||||| |||||
Sbjct 2075579 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGAT 2075638
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| ||||| | ||| | ||||||
Sbjct 2075639 GGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | |||||||||||||| | ||||| |||| ||||||||| ||
Sbjct 2075687 TCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACC 2075746
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| || || | || |||||| || || ||||||||||| ||
Sbjct 2075747 ATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 2075806
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || ||| || || |||||||| | ||| || ||||| |||||
Sbjct 2075807 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGAT 2075866
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| ||||| | ||| | ||||||
Sbjct 2075867 GGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 158 bits (174), Expect = 3e-33
Identities = 165/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | |||||||||||||| | ||||| |||| ||||||||| ||
Sbjct 2075915 TCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACC 2075974
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| || || | || |||||| || || ||||||||||| ||
Sbjct 2075975 ATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 2076034
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || || || || |||||||| | || || ||||| |||||
Sbjct 2076035 GTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGAT 2076094
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || ||||| ||||| | ||| | |||||||
Sbjct 2076095 GGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131
>seq3
Length=962442
Score = 152 bits (168), Expect = 1e-31
Identities = 164/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||| ||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 22556 TCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 22497
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || |||||| || || || || ||||||||
Sbjct 22496 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTT 22437
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | || || ||||| |||||
Sbjct 22436 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGAT 22377
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || ||||| | ||||| | || | |||||||
Sbjct 22376 GGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340
>seq7
Length=2235583
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || |||||||| || |||||||||||||| ||||||||
Sbjct 1158319 GAAAATTTGACCATCAGTAATGGAAATAACATTGGTTGGGATATAAGCAGAGACATCACC 1158378
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | | || || || || | ||| ||||||||
Sbjct 1158379 ACCTTGGGTTTCAATGATTGGCAAAGCAGTCAATGAACCACCACC 1158423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531062486246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |