Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq5 132 4e-26 seq3 114 1e-20 >seq5 Length=2091826 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| ||||||| |||||| || |||||||||||||| ||||| |||| | Sbjct 2075904 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075963 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | ||||||||||||||| || ||| | || | |||||||| ||| || Sbjct 2075964 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2076023 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| || || ||| || | | | | || |||| ||| Sbjct 2076024 ATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACC 2076083 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | ||| || || || || ||||||||||| | |||||||||||| Sbjct 2076084 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| ||||||| |||||| || |||||||||||||| ||||| |||| | Sbjct 2075676 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075735 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | ||||||||||||||| || ||| | || | |||||||| ||| || Sbjct 2075736 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075795 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| || || ||| |||| | | | || |||| || Sbjct 2075796 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075855 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | ||| || || || || ||||||||||| | ||||||||||| Sbjct 2075856 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| ||||||| ||| || || |||||||||||||| ||||| |||| | Sbjct 2075448 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075507 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | ||||||||||||||| || ||| | || | |||||||| ||| || Sbjct 2075508 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075567 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| || || ||| |||| | | | || |||| || Sbjct 2075568 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075627 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | ||| || || || || ||||||||||| | ||||||||||| Sbjct 2075628 TCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674 >seq3 Length=962442 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| ||||||| ||||||||| ||||| ||||| || ||||| |||| | Sbjct 22567 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22508 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | ||||||||||||||| || ||| | || | |||||||| ||| || Sbjct 22507 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGG 22448 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| ||||| || || || |||| | | | || || | ||| | Sbjct 22447 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACT 22388 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATT 101242 || | || || ||||| ||||| | ||||| | ||| ||||||||| || Sbjct 22387 TCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATTCTT 22337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660755065331