Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 2e-17
seq5 89.7 4e-13
>seq3
Length=962442
Score = 104 bits (114), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||||||||||| ||| | || ||||||||||||||||| ||||
Sbjct 22567 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22508
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| || || || ||||||||||| | || ||||||| |
Sbjct 22507 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 22450
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | |||||||| || ||||| ||| || ||| | |||||||| | || ||
Sbjct 22449 GGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGATGACTC 22392
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || || || ||||| ||||| || || |||||||||||
Sbjct 22391 AACTTCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 22341
>seq5
Length=2091826
Score = 89.7 bits (98), Expect = 4e-13
Identities = 165/238 (69%), Gaps = 8/238 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| || ||||| ||||||||
Sbjct 2075669 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075728
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| |||| | | || |||| || || || ||||| ||||| | || |||
Sbjct 2075729 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2075786
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279
|||| || | |||||| || || ||||| || || ||| | || ||||| |
Sbjct 2075787 TCTGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTG 2075844
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || | || || ||||| ||||||||
Sbjct 2075845 ATGATTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 87.8 bits (96), Expect = 1e-12
Identities = 169/244 (69%), Gaps = 8/244 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| ||| | ||| || ||||| ||||||||
Sbjct 2075897 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTA 2075956
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| |||| | | || |||| || || || ||||| ||||| | || |||
Sbjct 2075957 GTCGGACAAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGA 2076014
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280
|||| || | |||||| || || ||||| | || | ||| | || ||||| |
Sbjct 2076015 TCTGGTGGAATACCTTCTTTGTCTTGGATCTT-GGATTTGACGTTGTCAATAGTGTCTGA 2076073
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|| || ||||| | || || ||||| || || | || || ||||| |||||||| |
Sbjct 2076074 TGACTCAACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT--T 2076131
Query 44341 GTGA 44344
||||
Sbjct 2076132 GTGA 2076135
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| ||||||| ||||||||||| ||| | ||| || ||||| |||||||| ||||
Sbjct 2075448 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075507
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|||| | | || |||| || || || ||||| ||||| | || ||||||| |
Sbjct 2075508 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 2075565
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | |||||| || || ||||| || || ||| | || ||||| | |||||
Sbjct 2075566 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCTGATGATTC 2075623
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || | || || ||||| ||||||||
Sbjct 2075624 AACCTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990360513553
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |