Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 5e-21
seq7 89.7 7e-13
>seq4
Length=3023470
Score = 116 bits (128), Expect = 5e-21
Identities = 214/312 (69%), Gaps = 14/312 (4%)
Strand=Plus/Minus
Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771
||||||||| || ||||||||||| ||||||||| || || || |||||||| |
Sbjct 1390637 TTATCCTGTTTATTATATCAAAGATCGTGTGATATGGGCTTGGGTGTACCTTTCAATATT 1390578
Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831
|| || || || ||| | || | || | ||||| | || |||||| | ||||||
Sbjct 1390577 GCATCATATGCATTACTCACAAAGATGGTTGCTCATGTGGTGGATATGGATTGTGGAGAA 1390518
Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891
||||| ||||| || || || || ||| | || | ||||| | ||||| ||||||||
Sbjct 1390517 TTTATCCATACCTTGGGTGATGCCCATGTATATTTAGATCATATTGATGCATTAAAGGAA 1390458
Query 50892 CAATTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATTTT----AAAGAAAAAATCGAT 50947
||| |||| ||| ||| | || | || | | |||||| || |||
Sbjct 1390457 CAAATGACAAGAATACCAAAACAATTTCCCAAATTGGTGATCAAGGAAGAAAGAAAAGAT 1390398
Query 50948 CGAACTAAGA--------GATTTTAAATTTGAAGATTTCG-AATTGTTGGATTACGATCC 50998
|| ||| | |||||||||||||||||||| | |||||||||| || || ||
Sbjct 1390397 GCAATTAAAACTATTGATGATTTTAAATTTGAAGATTTTGAAATTGTTGGA-TATGAACC 1390339
Query 50999 TCATCCTTCTAT 51010
| ||||||| ||
Sbjct 1390338 TTATCCTTCAAT 1390327
Score = 105 bits (116), Expect = 9e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948
|| |||||||| ||||| |||| || |||| | ||| || | |||||||| || |||
Sbjct 534064 CCTTTTTCATCTGGTAAAGCAATCTCAATCTGAATTTCAAATCTACCAGGTCTCAACAAT 534123
Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008
|| ||||| |||||| |||| ||||||||||| |||| | ||| ||||| ||
Sbjct 534124 GCAGTATCAATCAAGTCGAGTCTATTGGTCATACCAATGACAAGAATATTGTTCAACTGA 534183
Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046
|| ||||| || || || ||||| |||||||| || ||
Sbjct 534184 TCAACACCATCCATCTTTGACAACAATTGATTCACAAC 534221
>seq7
Length=2235583
Score = 89.7 bits (98), Expect = 7e-13
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGG 63800
||| |||| |||| ||||| |||||||| ||| ||| | |||||||||||| |||
Sbjct 1972226 AAAGTACCTCAAATTGGTGACAAATTTGCATCTAG-ACATGGTCAAAAAGGTACCATTGG 1972168
Query 63801 TATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGT 63860
| | | || |||| || ||||||||||| || || ||||| || |||||||| |
Sbjct 1972167 TGTTACATACAGACATGAGGATATGCCTTTCACAGCTGAAGGTATTGTCCCCGATCTAAT 1972108
Query 63861 CATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896
||| || ||||| ||| |||| |||||||| ||
Sbjct 1972107 CATTAACCCACATGCTATTCCATCGCGTATGACAGT 1972072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667075124954040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |