Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq37 181 1e-40 >seq37 Length=3023111 Score = 181 bits (200), Expect = 1e-40 Identities = 566/868 (65%), Gaps = 25/868 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| ||| | |||||| || || || || || || | | || ||||||| Sbjct 2627608 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2627549 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| |||||||| ||||| || | || ||| |||| || |||| | | | Sbjct 2627548 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTT--TGTTACCCAAAGCAACCAA 2627491 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 |||||| || || |||||||| | |||||| ||||| || | || |||||||| | | Sbjct 2627490 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2627431 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || || || | || || || || ||| || || || |||| ||||| ||||||| Sbjct 2627430 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2627371 Query 16912 ACTAGCAAC--TCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 || |||| || | | || | ||| |||||| | ||| ||||| || ||||| Sbjct 2627370 TCTTTCAACAATCTT---TGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGC 2627314 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||||| ||||| || || || | | || | ||| || ||||| ||||| || || Sbjct 2627313 AAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGG 2627254 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| ||||| ||||| ||||| || || | || ||||| ||| || || ||||| Sbjct 2627253 CATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACC 2627194 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 ||| || | ||||| || | |||| || || || || || | ||||||| Sbjct 2627193 CTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCCA 2627134 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | | |||| || || || | || || | || ||||| || || || ||||| Sbjct 2627133 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2627074 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 || ||||| | | || | ||||| || || || | || || |||| || Sbjct 2627073 GAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGA 2627014 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 || ||||| ||||| || || || || ||||| || |||||| | |||||||| Sbjct 2627013 ATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAAC 2626954 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| | | || |||| | | ||||| || || || || || || |||||||| Sbjct 2626953 TTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAA 2626894 Query 17389 CGCCAATATATGCTT--AATGAAATATTTTTCGTCCGGTGTAA--GAA-----CGCGCCA 17439 |||| | || ||| ||||||| | |||| | ||| | || | | ||| Sbjct 2626893 GGCCA--AGATTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCCA 2626840 Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499 || | | |||||| || ||| | |||||| | ||||| || || | ||||| Sbjct 2626839 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2626780 Query 17500 TTTATACATATTCCAAATATCATTGTAT 17527 || ||||| | |||||| |||| |||| Sbjct 2626779 CTTGTACATTTGCCAAATTTCATGGTAT 2626752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545360635160