Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq37 232 7e-56 >seq37 Length=3023111 Score = 232 bits (256), Expect = 7e-56 Identities = 610/922 (66%), Gaps = 27/922 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||||||| ||| | |||||| ||||| || || || || | || || ||||| | Sbjct 2627608 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2627549 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||||||||| ||||| || | || ||| | || | ||||| | | ||| Sbjct 2627548 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGT-TACCCAAA----GCAAC 2627494 Query 16030 ---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086 |||||| || || |||||||| | |||||||||||| || | ||||| ||||| | Sbjct 2627493 CAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAA 2627434 Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146 | | || || | || | || || |||| || ||| || |||| ||||| |||| Sbjct 2627433 CAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAAT 2627374 Query 16147 GATATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACG 16205 || || | | ||| | | ||| |||| | || || ||||| | || | Sbjct 2627373 AAT-TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATG 2627315 Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265 | || || |||| ||||| || | | || | ||| |||||||| || || |||| Sbjct 2627314 CAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTG 2627255 Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325 ||||| ||||| ||||| |||||||| || | |||||| || || || || |||| Sbjct 2627254 GCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATAC 2627195 Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385 ||||||||| |||||||| | |||| || || || ||||| || |||||| Sbjct 2627194 CCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCC 2627135 Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445 || | |||| || || || | ||| || | || ||||| || || || || | Sbjct 2627134 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA 2627075 Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505 | || ||||| ||| | ||||| || ||||||| ||| || |||||| Sbjct 2627074 AGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTG 2627015 Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565 | || ||||| || || || || || ||||| || || || || | ||||| | Sbjct 2627014 AATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAA 2626955 Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625 |||| | |||| |||| ||| ||| ||||| || ||||| ||| ||||| |||| Sbjct 2626954 CTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAA 2626895 Query 16626 ACGCCAATATGTGCTT--AATGAAATATTTTTCGTCAGATGTAA--GAATAT-----GCC 16676 | ||||| | | ||| ||||||| | |||| | ||| | ||| | || Sbjct 2626894 AGGCCAAGA--TTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCC 2626841 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 |||| | | |||||| || ||| | |||||||| ||||| || || | |||| Sbjct 2626840 AATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCT 2626781 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAAGG 16796 | || ||||||| |||||| |||| |||| || ||||| | ||| || | | | | Sbjct 2626780 TCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGT 2626721 Query 16797 ATTCCTTTAACACGGGTTCATC 16818 |||||| || | ||||| || Sbjct 2626720 TTTCCTTCAAAAGTGGTTCTTC 2626699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414163470840