Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq22 116 3e-21
seq3 113 4e-20
>seq22
Length=92557
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| ||||||||||||| || || ||||| ||| || ||| | ||
Sbjct 76998 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 76939
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || | || || || || ||||||||| | || |||||||
Sbjct 76938 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 76879
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||| | || ||||| || |||||| |||||||| | |||| || |||| |||||
Sbjct 76878 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 76819
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| || ||||| || | ||| ||||||| |||| |||| ||
Sbjct 76818 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 76772
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| ||| ||||||||||||| || || ||||| ||| || || | |
Sbjct 77227 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 77168
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
||| || | | | | | || || || || ||||||||| | || ||||||
Sbjct 77167 AGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 77108
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
||||||| | || ||||| || |||||| |||||||| | |||| || |||| |||||
Sbjct 77107 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 77048
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| || ||||| || | ||| ||||||| |||| |||| ||
Sbjct 77047 CATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 77000
>seq3
Length=600384
Score = 113 bits (124), Expect = 4e-20
Identities = 166/234 (71%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 28956 GTAAA-AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGA 29014
||||| ||||||||| || ||||||| | ||||| |||||||| || ||| ||
Sbjct 21806 GTAAAGAATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGA 21865
Query 29015 ACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGT 29074
| | || || | | | || | ||| || || || || ||||| | ||
Sbjct 21866 GTCATCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACC 21925
Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134
||||||||||||| | |||||||| || |||||| |||||||| | |||| || ||||
Sbjct 21926 AGATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGA 21985
Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| || || |||||||||||| | ||| ||||||| |||| |||| ||
Sbjct 21986 CTACAACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428335806847235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |