Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq37 300 1e-76
>seq37
Length=3023111
Score = 300 bits (332), Expect = 1e-76
Identities = 601/884 (68%), Gaps = 15/884 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| |||||| |||||||||||||| || || || | || || |||||
Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060
|||||||||||||| ||||| | ||| | ||| ||| | | ||||| | | |
Sbjct 2627549 TCCATAAAATCAAATGGATTGGTG--ACATT-GTAAACTTTTTTGTTACCCAAAGCAACC 2627493
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
|||||||| || || |||||||| | ||| || ||| || | ||| |||||||| |
Sbjct 2627492 AATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2627433
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
|| |||| || | ||| || || || || | |||||| || | ||| |||||| | ||
Sbjct 2627432 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2627373
Query 16181 ATATCTCTTACTACACTATTTAACGGAGGGTT---TAATAAGTGTTTAAACATTATACAA 16237
|| |||| | ||| | ||| ||| | | ||| || ||||| | ||
Sbjct 2627372 AT---TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCAT 2627316
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||||||| || || ||||| || | || || || || || ||||| || | |||
Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||||| ||||| || || | ||| || || | ||||| || ||| || || |||
Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2627196
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
|| ||||| || ||||| |||||||||| |||| | || | || | || |||
Sbjct 2627195 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATC 2627136
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
||| | | ||||||| || || | ||||| ||| | || || ||||| |||
Sbjct 2627135 CATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2627076
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
|| ||| ||| || ||| |||||||| || || | ||| ||| |||||
Sbjct 2627075 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2627016
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597
|||||||| || ||||| || || ||||||||||| || | ||||| | |||||
Sbjct 2627015 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2626956
Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
||||||| |||| |||| | |||||||| ||||| || ||||| || || |||
Sbjct 2626955 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2626896
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTCA 16714
|| || | || | ||| ||| |||| || || | || | | | ||| |||
Sbjct 2626895 AAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATCA 2626836
Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774
|| |||||| |||||| | |||||| ||||||| || || || ||||||| ||
Sbjct 2626835 TGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTG 2626776
Query 16775 TACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818
||||||| ||| || || | ||| ||||||||||| |||||
Sbjct 2626775 TACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATA 2626732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511786088200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |