Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq22 134 1e-26
seq3 118 8e-22
>seq22
Length=92557
Score = 134 bits (148), Expect = 1e-26
Identities = 158/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 77018 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 77077
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 77078 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 77137
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | ||| || | ||||||| | |
Sbjct 77138 ATCTTGGAT--TTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCT 77195
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
| |||||||||||||| || ||||||||||||
Sbjct 77196 TACCGGTCAATGTTTTGACGAAAATTTGCATT 77227
Score = 127 bits (140), Expect = 2e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 76790 ACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 76849
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 76850 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 76909
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | || || | ||||||| | |
Sbjct 76910 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCT 76967
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| |||||||||||||| || |||||||||||
Sbjct 76968 TACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
>seq3
Length=600384
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 22021 ACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 21962
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | |||||||||||| || | |||||||| ||
Sbjct 21961 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 21902
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | ||| ||| | |||||| ||||
Sbjct 21901 ATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGTTTTA 21842
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| || | ||||| ||||| ||||||||| ||
Sbjct 21841 CCCGTAAGGGTTTTGACAAAGATTTGCATTCTT 21809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343828939565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |