Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq37 192 5e-44
seq22 105 6e-18
seq3 82.4 7e-11
>seq37
Length=3023111
Score = 192 bits (212), Expect = 5e-44
Identities = 606/924 (66%), Gaps = 29/924 (3%)
Strand=Plus/Plus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| |||||||||||| | || || ||| | | |||||||||||| ||| ||| |
Sbjct 2626699 GAAGAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCAT 2626758
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| ||||| |||||||| || ||||| | |||||| | ||
Sbjct 2626759 GAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGAT 2626818
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
| ||| ||||| |||||| || | || || ||| || ||| |||
Sbjct 2626819 TTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGACAATGAAAGGTTTTTCATT 2626878
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| | ||||| |||||||| || || |||||||||||||| || || ||||| |||
Sbjct 2626879 GGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAA 2626938
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
| ||||| ||||| ||| | | || || | || ||||| || || ||| |
Sbjct 2626939 AACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2626998
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CA 57861
|| |||||| | |||||||||| ||||| || | || || || || | ||||| ||
Sbjct 2626999 ATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGATCCA 2627058
Query 57862 ACGACGAGAAACG-TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAG 57920
| | || | || | | ||||| || || ||||| || || || ||||||
Sbjct 2627059 A--AGGA-AGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAG 2627115
Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980
|| || ||| | |||| |||||| || || || ||| || ||||| | |
Sbjct 2627116 GCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGTT 2627175
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC-TTTGCGGCAATATTTTGGAT 58039
|| || || || || || ||||| || ||| | | | | ||||| | || || ||| |
Sbjct 2627176 GCTTTTGCTGCTGTTGAGGGTATCTT-TTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2627234
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
|||||| | || | ||||| || |||| ||| ||| || ||||| | || || ||
Sbjct 2627235 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2627294
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCA--ATAAACC-GAC 58156
||| | || ||||||||||| ||| | ||| | | |||| || ||| ||| |||
Sbjct 2627295 AGGTTTACACACTGATTTTGCATGCTTGTTGT--TTGCTCATTTACAACATAGACCTGAC 2627352
Query 58157 GCGGGATCGCATCTTGGA--CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
| | | | ||| | ||||| || || || || | || ||||| || || |
Sbjct 2627353 CC---AAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTT 2627409
Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274
|| || || | || || || | || ||||| | | ||||||| | || ||
Sbjct 2627410 ACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTT 2627469
Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA----TTACAACAC 58330
|| ||||||||||||||| | ||| | | || |||| | | | ||||||
Sbjct 2627470 GAATTTGTTGCCGACAGATTATTGGTTG--CT--TTGGGTAACAAAAAAGTTTACAATGT 2627525
Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGa 58390
| ||||| |||||||||||| | ||||| | | || ||||| || || || ||
Sbjct 2627526 CACCAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGA 2627585
Query 58391 aaaaaaaGTTAGCGAATATCAAAA 58414
||||| |||| || || |||||
Sbjct 2627586 AAAAAGAGTTTCTGATTACCAAAA 2627609
Score = 143 bits (158), Expect = 2e-29
Identities = 485/750 (65%), Gaps = 14/750 (2%)
Strand=Plus/Plus
Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296
||||||| |||||| || | |||||| | |||||||| |||| ||| || |||| |
Sbjct 2502170 CCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCAAG 2502229
Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT---CAACGCGTCTC 23353
|| | || | ||| | | | |||| | | |||||| |||| | | ||
Sbjct 2502230 TTTGGAGCTTCATTTGGAGAGAACAATGTCCAA--TCAC-CATTTTGCTCAACTCTTTTC 2502286
Query 23354 ATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTG 23413
||||| | ||| || ||||| | ||| ||||| || | || | | || || ||
Sbjct 2502287 ATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTA 2502346
Query 23414 CCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAA 23473
|| ||||||| | | || | ||||| || | || || ||||| || || || ||
Sbjct 2502347 CCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATAT 2502406
Query 23474 ACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTG 23533
| ||||| || || |||||||| || || || ||||| || ||||| || |||||||||
Sbjct 2502407 AAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTG 2502466
Query 23534 TACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAA 23593
| || | | ||| || | | ||| || || | ||| || || | | |
Sbjct 2502467 AAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCA 2502526
Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653
|| | | |||| |||||| | || || || || || || | ||| || ||||
Sbjct 2502527 CCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAG 2502586
Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713
|| ||| || | |||||| || || || || || || ||||| | || ||||||
Sbjct 2502587 GCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAG 2502646
Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773
||||| || |||||||| | ||| || ||| |||| ||||| || | ||
Sbjct 2502647 AAACAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGA 2502706
Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC----GGCATCAATGTCCTC 23829
|||||||||| | ||||| | |||||| || || || | || || || ||
Sbjct 2502707 GTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGAT--ATCTC--T 2502762
Query 23830 TCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCC 23889
||| || ||||| || || || | ||| |||| || ||| ||||| || | ||
Sbjct 2502763 TCCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCC 2502822
Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949
||||| |||| |||||| | | || ||||| |||||||| || | ||||| ||
Sbjct 2502823 ATTAATACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAA 2502882
Query 23950 GTCACGATCGTGCACTATGGCCGAATTCAA 23979
||||| || | || || || || || ||
Sbjct 2502883 ATCACGGTCATAAACAATTGCTGAGTTTAA 2502912
Score = 100 bits (110), Expect = 3e-16
Identities = 212/310 (68%), Gaps = 11/310 (4%)
Strand=Plus/Plus
Query 22432 CAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTG 22491
||||||||| | || | | || || | ||||||||| || | ||| || | |
Sbjct 2501359 CAAATCTTTCAACAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGA 2501418
Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551
|||||| || || ||| | || |||||| |||||||||| |||| || || | || ||
Sbjct 2501419 GTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGA 2501478
Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAAT-TTTAC 22610
||| || ||||| || |||| || | |||||||||| ||||| || | || ||| |
Sbjct 2501479 AGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTC 2501538
Query 22611 TCTTGAG-CATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669
| | | |||| ||| ||||||| || | ||| | ||| ||||| ||||||
Sbjct 2501539 TTTCAATTCATC--CCAATCCCACAATTCAGTTGGCTTTC---TGTTCCACAAGTCGTAT 2501593
Query 22670 TGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCG 22727
||||||| || |||| || || ||||| ||| ||||| || ||||| | | ||
Sbjct 2501594 TGCAACAAACCTTGCGA--TGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCG 2501651
Query 22728 CGGCAAGTTC 22737
| || | |||
Sbjct 2501652 CCGCTAATTC 2501661
>seq22
Length=92557
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || || || |||||| | || |||||| | ||
Sbjct 76998 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 76939
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||||| ||||| | || || || ||
Sbjct 76938 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 76879
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 76878 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 76819
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||||||||||| || | || |||| | ||| |||| || |||
Sbjct 76818 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGGT 76771
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || || || |||||| | || ||||| | ||
Sbjct 77226 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATCA 77167
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||||| ||||| | || || || ||
Sbjct 77166 GACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 77107
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 77106 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 77047
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || | || |||| | ||| |||| || ||||
Sbjct 77046 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTA 76998
>seq3
Length=600384
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || || || || || || ||||| ||||| | || ||||| | ||
Sbjct 21813 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCT 21872
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||||| | || || || ||
Sbjct 21873 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAA 21932
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 21933 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 21992
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 21993 ATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 22040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766193833040
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