Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq37 178 3e-39 >seq37 Length=3023111 Score = 178 bits (196), Expect = 3e-39 Identities = 312/450 (69%), Gaps = 27/450 (6%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| |||||||| ||||| || ||||| || ||||| | || || |||||||||||| Sbjct 2627173 GTTGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGG 2627232 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || || | |||| || | |||| |||||||| || |||| | | || Sbjct 2627233 TTGAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGAT 2627292 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA--TACCC 102095 |||||| | || || ||||||||| || || |||| | | ||| Sbjct 2627293 GAAGGTTTACACACTGATTTTGCATGCTTGTTG------------TTTGCTCATTTACAA 2627340 Query 102096 CATCAAGA---GA---AAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAAC 102146 ||| ||| || || |||| |||| |||| | |||||||| || ||||||| Sbjct 2627341 CAT--AGACCTGACCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAA 2627398 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 ||||||| | || | | | |||| |||| || |||||||||| || ||||||||| Sbjct 2627399 AAGAATTCTTTACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGT 2627458 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCAC 102265 | || || |||||||||| || || | | ||||||||| |||| | | ||||| Sbjct 2627459 GTCAATATGTTGAATTTGTTGCCGACAGATTATTGGTTGCTTTGGGTAACAAAAAAG-TT 2627517 Query 102266 TATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAAC 102325 || ||||| ||||| || || || ||||| ||||| ||| | | ||||||||| Sbjct 2627518 TACAATGTCACCAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAAT 2627577 Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 || |||||||| ||||| | || || ||| Sbjct 2627578 TTCTTTGAAAAAAGAGTTTCTGATTACCAA 2627607 Score = 96.9 bits (106), Expect = 7e-15 Identities = 221/330 (67%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG-GCCAAGAAGAAGAT 35328 ||||||| |||||| || || || || |||||| ||| | || ||| || | Sbjct 1390876 GAACTCTTGTGGTTTATTGCTGGATCCACGGATGCCAAAATCTTGAGTGAAAAAGGAGTT 1390817 Query 35329 ACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAG 35388 | | || ||| | | ||||| ||| |||||||| |||| | || || | || | Sbjct 1390816 AAA-ATATGGGAGGGCAATGGTCTGCGAGAATTTTTAGACAATCTTGGATTGACCCATCG 1390758 Query 35389 AGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 || || ||||||||||| || || || || |||||| | ||||||||||||||||| Sbjct 1390757 TCGTGAAGGTGATTTGGGACCAGTTTATGGGTTTCAATGGAGGCATTTTGGTGCTGAATA 1390698 Query 35449 TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAA 35508 | | || | | || |||||||| | ||| ||||||| ||| || || | || Sbjct 1390697 TAAAGATTGCGATACTGACTATACTGGCCAAGGTTTTGATCAGTTGCAAGATGTAATTAA 1390638 Query 35509 GACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568 || | | | |||||| |||||||||| || || ||| | || ||||| || ||| Sbjct 1390637 GAAGTTAAAAACTAATCCATATGATAGAAGAATCATCATGTCAGCTTGGAACCCACCGGA 1390578 Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCA 35598 | | | | ||||| | || ||||| || Sbjct 1390577 TTTCCTGTTGATGGCGTTGCCCCCATGTCA 1390548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583530875335