Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq37 304 1e-77 >seq37 Length=3023111 Score = 304 bits (336), Expect = 1e-77 Identities = 603/879 (69%), Gaps = 23/879 (3%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || ||| |||||||||||||||||| || || ||||| ||| || ||||| Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||||||||||||||| | ||||| | ||||| | ||| | | | | Sbjct 2627549 TCCATAAAATCAAATGGATTGGT-GACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2627491 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 |||||| || |||| ||| |||| ||||||| |||| || | ||||||||| || | | Sbjct 2627490 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2627431 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 | || || | | || || || ||||||||||| || || || || | ||||| Sbjct 2627430 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2627371 Query 13820 AATTGTAATAATCTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13877 || || ||||| || | ||| || || || ||| ||| | || || ||| Sbjct 2627370 TCTTTCAACAATCT--TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2627313 Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937 |||||| || | || ||||| | || ||| | ||| || ||||| || ||||||||| Sbjct 2627312 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2627253 Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997 || ||||||| || || ||||| || || | |||||| || || || || || ||| Sbjct 2627252 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2627193 Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCA 14056 ||||| |||||||| || | |||| || ||||| |||| | | | || ||||| Sbjct 2627192 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2627134 Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | | | ||||| |||| || |||||||| | || |||||||||||||| ||||| Sbjct 2627133 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2627074 Query 14117 ATATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173 | || |||| |||| | | |||| || || || ||||| | ||| ||| |||| Sbjct 2627073 GAAATCGGCTTC-CTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAATAAGTTTC 2627017 Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTG 14233 || || ||||||||||| || || ||||||||||| || | ||||| | ||| Sbjct 2627016 TGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2626957 Query 14234 TACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293 ||||| | |||| |||| |||| ||||||||||| ||||||||| || || || Sbjct 2626956 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2626897 Query 14294 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCA 14347 ||| ||||| || || ||| || | | ||||||| || | ||| | |||| Sbjct 2626896 AAAGGCCAAGATTCTTCCAATGAAAAA---CCTTTCATTGTCATTCAATTTCTCTCTCCA 2626840 Query 14348 ATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14407 ||| | ||| ||| | ||| | ||| || | ||||| || || |||| || Sbjct 2626839 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2626780 Query 14408 TTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14446 || |||||| ||| ||||| | ||| |||||||| Sbjct 2626779 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAA 2626741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727778125800