Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq37 242 3e-59
>seq37
Length=3023111
Score = 242 bits (268), Expect = 3e-59
Identities = 585/878 (67%), Gaps = 17/878 (2%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || ||||||||||||||| || || || || || | || || |||||
Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAGT 12976
||||||||||| || ||||| | ||| | ||| |||||| || || | |
Sbjct 2627549 TCCATAAAATCAAATGGATTGGTG--ACATT-GTAAACTTTTTTGTTACCCAAAGCAACC 2627493
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
|| |||||||| |||||||| || | || || ||| || | ||| |||||||| |
Sbjct 2627492 AATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2627433
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096
|| | || |||| || || || || || | |||||| || ||||||||||| |||
Sbjct 2627432 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2627373
Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGG---ATTTGATAGATGCTTAAACATCATACAT 13153
|| |||| || ||| | ||| || | || ||| ||||| || |||
Sbjct 2627372 AT---TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCAT 2627316
Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213
||||||||| ||| || |||||||| | || || | || || ||||| || | ||
Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256
Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273
||||| | |||| || || | ||| || || | ||||||||| || ||||| ||
Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2627196
Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333
|| ||||| || ||||| || | ||| || ||| || || || | | |||
Sbjct 2627195 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATC 2627136
Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393
|| | ||||||| | || || | ||||| || |||| || || || |||
Sbjct 2627135 CATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2627076
Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453
|| ||| |||||| || |||||||| || |||||||| ||| |||||
Sbjct 2627075 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2627016
Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513
|||||||| ||||||||| ||||||||||||||||| || | || || | | |||
Sbjct 2627015 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2626956
Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573
||||| | |||| |||| | |||||||| ||||| || || ||| ||||| |||
Sbjct 2626955 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2626896
Query 13574 aaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATC 13629
|| | |||| | | | ||| || |||| || || ||| || | ||||||
Sbjct 2626895 AAGGCCAAGATTCTTC-CAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATC 2626837
Query 13630 TGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTT 13689
||| |||||| |||||| | || || | ||||| || || || ||||||||||
Sbjct 2626836 ATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTT 2626777
Query 13690 ATACATCATCCATATATCCTTATAAACAATGGGAAACA 13727
||||| ||| || || | || ||| |||||||
Sbjct 2626776 GTACATTTGCCAAATTTCATGGTATCTAATAGGAAACA 2626739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982205653874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |