Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq37 242 3e-59 >seq37 Length=3023111 Score = 242 bits (268), Expect = 3e-59 Identities = 585/878 (67%), Gaps = 17/878 (2%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || ||||||||||||||| || || || || || | || || ||||| Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAGT 12976 ||||||||||| || ||||| | ||| | ||| |||||| || || | | Sbjct 2627549 TCCATAAAATCAAATGGATTGGTG--ACATT-GTAAACTTTTTTGTTACCCAAAGCAACC 2627493 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 || |||||||| |||||||| || | || || ||| || | ||| |||||||| | Sbjct 2627492 AATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2627433 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 || | || |||| || || || || || | |||||| || ||||||||||| ||| Sbjct 2627432 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2627373 Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGG---ATTTGATAGATGCTTAAACATCATACAT 13153 || |||| || ||| | ||| || | || ||| ||||| || ||| Sbjct 2627372 AT---TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCAT 2627316 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 ||||||||| ||| || |||||||| | || || | || || ||||| || | || Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | |||| || || | ||| || || | ||||||||| || ||||| || Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2627196 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 || ||||| || ||||| || | ||| || ||| || || || | | ||| Sbjct 2627195 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATC 2627136 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || | ||||||| | || || | ||||| || |||| || || || ||| Sbjct 2627135 CATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2627076 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 || ||| |||||| || |||||||| || |||||||| ||| ||||| Sbjct 2627075 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2627016 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513 |||||||| ||||||||| ||||||||||||||||| || | || || | | ||| Sbjct 2627015 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2626956 Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573 ||||| | |||| |||| | |||||||| ||||| || || ||| ||||| ||| Sbjct 2626955 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2626896 Query 13574 aaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATC 13629 || | |||| | | | ||| || |||| || || ||| || | |||||| Sbjct 2626895 AAGGCCAAGATTCTTC-CAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATC 2626837 Query 13630 TGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTT 13689 ||| |||||| |||||| | || || | ||||| || || || |||||||||| Sbjct 2626836 ATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTT 2626777 Query 13690 ATACATCATCCATATATCCTTATAAACAATGGGAAACA 13727 ||||| ||| || || | || ||| ||||||| Sbjct 2626776 GTACATTTGCCAAATTTCATGGTATCTAATAGGAAACA 2626739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982205653874