Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq37 159 8e-34 seq22 154 3e-32 >seq37 Length=3023111 Score = 159 bits (176), Expect = 8e-34 Identities = 546/840 (65%), Gaps = 21/840 (3%) Strand=Plus/Plus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 ||| || ||| |||||||| |||| | || || || ||||||| ||||||| | || Sbjct 2626758 TGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGA 2626817 Query 268789 TCTGTCTTATGA-CTTAATAGATTGGAAA----AATTTAAAACCAGAAGAAAGAAGATTT 268843 | | | | || ||| || ||||||| | |||| || || | ||||| || Sbjct 2626818 TTTAGGTAAAGATCTTCAT-GATTGGAGAGAGAAATTGAATGACA-ATGAAAGGTTTTTC 2626875 Query 268844 ATATCTTATATTCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGT 268902 || | | | ||||| | ||||| || | ||||||||| ||||| ||||| | || Sbjct 2626876 AT-TGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGT 2626934 Query 268903 AGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGAT 268962 || || || | | || || || ||||||||||||| || ||||| || ||||| || Sbjct 2626935 GGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAAT 2626994 Query 268963 AGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGA 269022 || ||||| ||||||||||| | || |||| || || |||||||| | || Sbjct 2626995 CATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGA 2627054 Query 269023 TAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaa 269082 | || ||| | |||| | |||| ||| || | | ||| || Sbjct 2627055 TCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAA 2627114 Query 269083 aTCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGT 269139 |||| ||||| | | |||||| | ||| || || || | || || || || Sbjct 2627115 GGCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGT 2627174 Query 269140 TGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTT 269199 ||||||||| ||||| || ||||| || || || || ||||| | || || ||||| Sbjct 2627175 TGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2627234 Query 269200 GAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGA 269259 |||||| ||||| | ||||||||||| || || || || |||||||| | | || || Sbjct 2627235 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2627294 Query 269260 AGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTC 269319 |||||||||| || || || || || || ||| || ||| | ||| | |||| Sbjct 2627295 AGGTTTACACACTGATTTTGCATGCTTGTTGTTTGCTCATT---TACAACATAGACCTGA 2627351 Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379 | | | | || | |||||| | ||| ||| | |||| |||||| | || Sbjct 2627352 CCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTAC 2627411 Query 269380 GGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAA 269439 || || | | | | | | || |||||| | || | |||| ||||| || | Sbjct 2627412 TGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTGA 2627471 Query 269440 GTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTTGA 269496 || || | || ||||| |||| |||| || || |||||| || || || Sbjct 2627472 ATTTGTTGCCGACAGATTATTGGTTGCTTTGGG---TAACAAAAAAGTTTACAATGTCAC 2627528 Query 269497 AAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556 ||||| ||| ||||||||||||||| || || | |||||| | |||||||| || || Sbjct 2627529 CAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2627588 >seq22 Length=92557 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | |||| Sbjct 76796 TGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 76855 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 76856 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 76915 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || | ||| ||||||| || || |||||||| || Sbjct 76916 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 76975 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | |||||| || || || ||||| Sbjct 76976 AATGTTTTGACGAAAATTTGCAT 76998 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | |||| Sbjct 77024 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 77083 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 77084 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 77143 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| || || || | || || | || ||||||| || || |||||||| || Sbjct 77144 GATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTACCGGTC 77203 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | |||||| || || || |||||| || Sbjct 77204 AATGTTTTGACGAAAATTTGCATTGTG 77230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397854165196