Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq37 159 8e-34
seq22 154 3e-32
>seq37
Length=3023111
Score = 159 bits (176), Expect = 8e-34
Identities = 546/840 (65%), Gaps = 21/840 (3%)
Strand=Plus/Plus
Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788
||| || ||| |||||||| |||| | || || || ||||||| ||||||| | ||
Sbjct 2626758 TGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGA 2626817
Query 268789 TCTGTCTTATGA-CTTAATAGATTGGAAA----AATTTAAAACCAGAAGAAAGAAGATTT 268843
| | | | || ||| || ||||||| | |||| || || | ||||| ||
Sbjct 2626818 TTTAGGTAAAGATCTTCAT-GATTGGAGAGAGAAATTGAATGACA-ATGAAAGGTTTTTC 2626875
Query 268844 ATATCTTATATTCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGT 268902
|| | | | ||||| | ||||| || | ||||||||| ||||| ||||| | ||
Sbjct 2626876 AT-TGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGT 2626934
Query 268903 AGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGAT 268962
|| || || | | || || || ||||||||||||| || ||||| || ||||| ||
Sbjct 2626935 GGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAAT 2626994
Query 268963 AGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGA 269022
|| ||||| ||||||||||| | || |||| || || |||||||| | ||
Sbjct 2626995 CATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGA 2627054
Query 269023 TAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaa 269082
| || ||| | |||| | |||| ||| || | | ||| ||
Sbjct 2627055 TCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAA 2627114
Query 269083 aTCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGT 269139
|||| ||||| | | |||||| | ||| || || || | || || || ||
Sbjct 2627115 GGCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGT 2627174
Query 269140 TGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTT 269199
||||||||| ||||| || ||||| || || || || ||||| | || || |||||
Sbjct 2627175 TGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2627234
Query 269200 GAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGA 269259
|||||| ||||| | ||||||||||| || || || || |||||||| | | || ||
Sbjct 2627235 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2627294
Query 269260 AGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTC 269319
|||||||||| || || || || || || ||| || ||| | ||| | ||||
Sbjct 2627295 AGGTTTACACACTGATTTTGCATGCTTGTTGTTTGCTCATT---TACAACATAGACCTGA 2627351
Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379
| | | | || | |||||| | ||| ||| | |||| |||||| | ||
Sbjct 2627352 CCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTAC 2627411
Query 269380 GGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAA 269439
|| || | | | | | | || |||||| | || | |||| ||||| || |
Sbjct 2627412 TGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTGA 2627471
Query 269440 GTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTTGA 269496
|| || | || ||||| |||| |||| || || |||||| || || ||
Sbjct 2627472 ATTTGTTGCCGACAGATTATTGGTTGCTTTGGG---TAACAAAAAAGTTTACAATGTCAC 2627528
Query 269497 AAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556
||||| ||| ||||||||||||||| || || | |||||| | |||||||| || ||
Sbjct 2627529 CAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2627588
>seq22
Length=92557
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 76796 TGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 76855
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 76856 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 76915
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | ||| ||||||| || || |||||||| ||
Sbjct 76916 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 76975
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| |||||| || || || |||||
Sbjct 76976 AATGTTTTGACGAAAATTTGCAT 76998
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 77024 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 77083
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 77084 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 77143
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| || || || | || || | || ||||||| || || |||||||| ||
Sbjct 77144 GATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTACCGGTC 77203
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| |||||| || || || |||||| ||
Sbjct 77204 AATGTTTTGACGAAAATTTGCATTGTG 77230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397854165196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |