Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq37 136 5e-27
seq16 89.7 6e-13
>seq37
Length=3023111
Score = 136 bits (150), Expect = 5e-27
Identities = 179/246 (73%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCT--ATATCAGATGG 7064
||||||| || || || ||||||||||| || || | | | | | | ||| | |||
Sbjct 1390528 CATAAAACTGGCAAAAGACATGACATGGGGGCAACGC--CATCAACAGGAAATCCGGTGG 1390585
Query 7065 ATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAAT 7124
|||||||| | ||| | || | |||||||| |||||| |||||||| || | || |
Sbjct 1390586 GTTCCAAGCTGACATGATGATTCTTCTATCATATGGATTAGTTTTTAACTTCTTAATTAC 1390645
Query 7125 TATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGC 7184
||| || ||||| | ||| || || ||| | ||||| |||| | |||| | |||
Sbjct 1390646 ATCTTGCAACTGATCAAAACCTTGGCCAGTATAGTCAGTATCGCAATCTTTATATTCAGC 1390705
Query 7185 TCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATT 7244
|||||||| ||||||||||||||||||| || || ||||||||||| |||||| |
Sbjct 1390706 ACCAAAATGCCTCCATTGAAACCCATAAACTGGTCCCAAATCACCTTCACGACGATGGGT 1390765
Query 7245 AAATCC 7250
|||||
Sbjct 1390766 CAATCC 1390771
Score = 127 bits (140), Expect = 2e-24
Identities = 216/306 (71%), Gaps = 14/306 (5%)
Strand=Plus/Plus
Query 6700 GGATGAGGATTATAATCTAACAATT-CAAAATCTTCAAATTTAAAATCAC--ATAAATT- 6755
|||| ||| | ||| || ||||||| ||||||||||||||||||||||| ||| ||
Sbjct 1390140 GGATAAGGTTCATA-TCCAACAATTTCAAAATCTTCAAATTTAAAATCATCAATAGTTTT 1390198
Query 6756 -ATCAGACtttttttttAAT-----ATTAC-AACAGGTGAAG--GTTTTATTGATCGAGT 6806
|| | |||| ||| | || || || | ||| ||||| | || ||
Sbjct 1390199 AATTGCATCTTTTCTTTCTTCCTTGATCACCAATTTGGGAAATTGTTTTGGTATTCTTGT 1390258
Query 6807 TAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATG 6866
| |||||| |||| || | |||||||||||||| | ||| ||||| || | |||||
Sbjct 1390259 CATTTGTTCCTTTAATGCATCAATATGATCTAAATATACATGGGCATCACCCAAGGTATG 1390318
Query 6867 AATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATA 6926
|||||||| || | |||||| || | ||||||| | | ||| | |||||||||
Sbjct 1390319 GATAAATTCTCCACAATCCATATCCACCACATGAGCAACCATCTTTGTGAGTAATGCATA 1390378
Query 6927 AGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACA 6986
|| || | ||| ||||||||||| || |||||||| ||||||||||| || |||
Sbjct 1390379 TGATGCAATATTGAAAGGTACACCCAAGCCCATATCACACGATCTTTGATATAATAAACA 1390438
Query 6987 AGATAA 6992
|||||
Sbjct 1390439 GGATAA 1390444
>seq16
Length=320745
Score = 89.7 bits (98), Expect = 6e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411
||| ||||| |||| ||||| || ||||| ||| || ||||||||| || ||||
Sbjct 56817 AAAGTACCTCAAATTGGTGACAAATTTGCATCTAGACATGGTCAAAAAGGTACCATTGGT 56758
Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471
| | || | || || ||||||||||| || || ||||| || || ||||| ||
Sbjct 56757 GTTACATACAGACATGAGGATATGCCTTTCACAGCTGAAGGTATTGTCCCCGATCTAATC 56698
Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
||||||||||||||| ||||| || |||||
Sbjct 56697 ATTAACCCACATGCTATTCCATCGCGTATGAC 56666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871724409200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |