Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq37 322 6e-83
>seq37
Length=3023111
Score = 322 bits (356), Expect = 6e-83
Identities = 1206/1884 (64%), Gaps = 38/1884 (2%)
Strand=Plus/Plus
Query 61991 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049
||||| |||| || || | ||| || || | || ||| | | |||||||| || || |
Sbjct 2501037 CAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCTGTCT 2501096
Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109
||| || ||||||| ||||| ||||| || || | ||| | ||||||
Sbjct 2501097 TTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGATCTT 2501156
Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169
|| || || || | ||||| ||| |||||||| || | || || | |||||| |
Sbjct 2501157 TGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCCATAT 2501216
Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 62229
|| || |||||| | |||||||||| |||||| || | | ||| || || ||||
Sbjct 2501217 CAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCGTCTG 2501276
Query 62230 GAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62286
||| ||||| | |||||||| ||| | || ||||| ||| |||| || | |
Sbjct 2501277 GAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATAGCGT 2501336
Query 62287 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62346
||||||| | | | || ||| || | | | | |||||||| | |||||| |
Sbjct 2501337 CATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTTGAAACT 2501396
Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406
| |||| ||| ||||| | || ||||||||| || || || || | | ||||| |
Sbjct 2501397 CACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGT 2501456
Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466
| ||||||||||| | || || ||||| ||||| || |||||||| || ||||| |
Sbjct 2501457 TACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCA 2501516
Query 62467 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526
||||| | | | || ||||| | ||||||| ||| | || | ||
Sbjct 2501517 TACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTGGCTTTC 2501576
Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 62582
||| | | ||| | | |||| | | ||| || ||
Sbjct 2501577 TGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTG----AGCCTTGGTAAGTT 2501632
Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642
|| || || ||||| | | | |||| |||| || || | ||| | | ||| ||
Sbjct 2501633 TCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAGATT 2501692
Query 62643 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAA 62701
||||| || || | |||| | || ||||| || ||||||| ||| | ||
Sbjct 2501693 GTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAA 2501752
Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761
| ||||| || || || || ||||| ||||| | | || ||||| |||||| | ||
Sbjct 2501753 -ACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTT 2501811
Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62821
|| | |||||||| |||| || || || || ||| || | | |||| | ||| |
Sbjct 2501812 TGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACG 2501871
Query 62822 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATC--GC---CCATC 62872
|| |||||| || || | || ||| ||| | | || | || |||||
Sbjct 2501872 TGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATC 2501931
Query 62873 T-----ATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62927
| || || | || || |||| || |||| |||||||| || || ||||
Sbjct 2501932 CTGCTCAATAAAAGAAGGT--AAAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATCT 2501989
Query 62928 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 62987
| ||| ||||| | || ||| || | || | | || ||| || ||||||
Sbjct 2501990 GGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTT 2502049
Query 62988 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63047
| ||| || ||| ||||||| |||||||| || | |||||||| |||||||| |||
Sbjct 2502050 TTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCA 2502109
Query 63048 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 63107
| || | || | || | | ||| | | |||| || ||| | ||| || | |
Sbjct 2502110 GTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTT--TTTCTACCAC 2502167
Query 63108 --CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165
| |||| | |||||| |||||| | || ||||| || || || |||
Sbjct 2502168 GACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCA 2502227
Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225
| ||| ||||| ||| | | ||| | ||| || || | | || |||| |||||
Sbjct 2502228 AGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCA 2502287
Query 63226 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63285
|||| | ||| || ||||| | |||| || | ||||| | |||| ||| || || |
Sbjct 2502288 TAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTAC 2502347
Query 63286 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63345
| |||||| ||| || | ||| | | ||||||| ||||| ||||| | ||||
Sbjct 2502348 CATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATA 2502407
Query 63346 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63405
|| | | | || || | ||||| || || ||||| | || | ||| ||||| ||
Sbjct 2502408 AAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGA 2502467
Query 63406 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTC 63465
|||| | | ||||||||||||||| ||||| |||| |||||||| | ||| ||| |
Sbjct 2502468 AAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCAC 2502527
Query 63466 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525
|| ||| |||||| || || | || || || || || |||| || || || |
Sbjct 2502528 CAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGG 2502587
Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585
| ||| ||||| |||||||| ||||| || || ||| || |||| || | |
Sbjct 2502588 CACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGA 2502647
Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645
|||| |||||||| | ||| || ||||| || || |||||| | || |
Sbjct 2502648 AACAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAG 2502707
Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63705
|||| || ||| ||| | | |||||| ||||||||| || ||||| | | ||
Sbjct 2502708 TAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCAT 2502767
Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63765
| || || | || || | ||| | || ||| || ||||||||| | | || || |
Sbjct 2502768 GGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAA 2502827
Query 63766 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 63823
| ||||| || ||| | ||||||||||| || ||||| || ||||| ||||| ||
Sbjct 2502828 TACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAA--TC 2502885
Query 63824 TCGTTCGTAAATAATAACCGAGTT 63847
|| || |||| ||| | |||||
Sbjct 2502886 ACGGTCATAAACAATTGCTGAGTT 2502909
Score = 320 bits (354), Expect = 2e-82
Identities = 605/880 (69%), Gaps = 14/880 (2%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| ||| || | |||||| || ||||| || || || |||| || |||||
Sbjct 2627609 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2627550
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| |||||||| |||||||| ||||| |||| |||||| ||||| || |
Sbjct 2627549 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2627490
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
||||| || || || ||||| | |||| ||||| | |||||||||||| | |
Sbjct 2627489 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2627430
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252
||||||| | || |||||| ||||||| |||||| || || || || |||||
Sbjct 2627429 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2627370
Query 33253 GATCTAACGGTTTCTTCACTC-GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311
| ||| | | || || ||| ||| |||||| ||||| ||| ||||| ||
Sbjct 2627369 CTTTCAACAATCT-TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCAAA 2627311
Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371
||| ||| | ||| || || | || ||| | ||| |||||||| || | ||| |||||
Sbjct 2627310 ATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGCAT 2627251
Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431
|| || | ||| || | ||| || |||||||| || |||||| || ||||| || ||
Sbjct 2627250 TAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCCTC 2627191
Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCGCTGTCATGTATCCA-C 33486
|| |||||||| |||| | |||||| || ||| | || || || ||||| |
Sbjct 2627190 AACAGCAGCAAAAGCAACCAATCTCTCAGCA-AACAATGCATCGGAATCTTGAATCCATC 2627132
Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546
| || |||||||| ||||||||||| | ||| || ||||| || ||||| || |
Sbjct 2627131 TGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAAG 2627073
Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606
| | ||| || ||| || | |||||| || ||||| | ||| |||| |||
Sbjct 2627072 AAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGAA 2627013
Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666
||||||||||| || || || || || || || || | || || | ||| || |||
Sbjct 2627012 TGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAACT 2626953
Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726
|| | | |||| |||| |||| |||||||| || || || ||| ||| || |||||
Sbjct 2626952 TCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAAG 2626893
Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTAT---TCCAATCATT 33782
||||| | | || ||| | |||| | || || | ||| | |||||||||
Sbjct 2626892 GCCAAGATTCTTCCAATGAAAAACCTTTCAT-TGTCATTCAATTTCTCTCTCCAATCATG 2626834
Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842
| ||||||| || ||| | |||||| | ||||| |||||||| || ||||| || ||
Sbjct 2626833 AAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTA 2626774
Query 33843 CATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882
||| | ||| || |||| ||| || || || || |||
Sbjct 2626773 CATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626734
Score = 89.7 bits (98), Expect = 6e-13
Identities = 412/640 (64%), Gaps = 18/640 (3%)
Strand=Plus/Minus
Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAG 63237
|||| ||| | | ||| ||||| || ||| | ||| |||| || |||||| | |||||
Sbjct 920548 CATCGGGAGAAAACAAAGACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAG 920489
Query 63238 GAATCCAAAGAGCTAT-AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296
||||||| | | | || ||| | ||| || || | | || ||||| || |||||||
Sbjct 920488 GAATCCACA-ACCCATAAAACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTT 920430
Query 63297 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63356
| | | | | | | | | ||| | |||||| || |||||||| || || | | ||
Sbjct 920429 CTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCT 920370
Query 63357 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63416
|| || | |||| ||| || || || | |||| || ||||| || | |||| |||
Sbjct 920369 CCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAAC 920310
Query 63417 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGA 63476
|| |||| | || || | | |||||||| | || |||| || ||| | |
Sbjct 920309 ATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTA 920250
Query 63477 ATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG-CGCATCGTT 63534
||||| ||| ||| | || || || || | |||||| ||||| | ||| || |
Sbjct 920249 ATATTGTGAATATGA-ATTCCAATACCGCCAGAAGCTTTAGAAATTAACGCCGCTTC-AT 920192
Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTA 63593
| ||| | |||||| || || || |||||| ||| || ||| | ||| |||
Sbjct 920191 GAAGCGTTTGATAGATCCCATCAATTGAATCATCCTTCATTGCTAA-CAAAAAGCAGGAT 920133
Query 63594 GACATTTGGT--GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651
|| | | || ||| | ||| |||||| ||| || || || || | ||
Sbjct 920132 GAAAGGTAGTTGTACGCGCA--TCCGGCATTATATAGTGTTGGCAGTGCATGGATGAAGT 920075
Query 63652 ATTTTTCAGAAAGTAGATTGTACGT---CTCAATAGCTGAGTCTATATCCCATTGATGAA 63708
|||||| || | ||| ||| || ||||| ||| | ||| || ||| ||||
Sbjct 920074 ATTTTTGGGACATTAGTACGTATGTTTCCTCAACCGCT---TGTATGTCATCTTGGTGAA 920018
Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768
|| ||| || || | | ||||||| | || ||||| | || |||||| ||
Sbjct 920017 TTTCTATAGCCACTCTGAGAAACATGTATTCTGGAGTTTCAGCTATTTTGTTGCCAGTTC 919958
Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63808
|| | | || || ||||||||||| || | ||||||||
Sbjct 919957 TCCAAAGATATGAGTTTTCCAAAGTCTTGATTCCAAAATA 919918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946911886920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |