Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq22 127 2e-24 seq3 127 2e-24 >seq22 Length=92557 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| |||||||| | || || || ||||| ||| | || ||||| Sbjct 77227 AATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATC 77168 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| |||| || ||| || || || |||||||| | || |||| Sbjct 77167 AGACACTATTG-ACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATC 77109 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||| | |||| ||| || |||||||| ||||||| | ||| || |||| || | Sbjct 77108 AACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACA 77049 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||||| || || | || |||||||||||||| |||| || Sbjct 77048 ACATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 77000 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| | || || || ||||| ||| | || || || Sbjct 76998 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 76939 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| || || || |||||||| | || ||||| Sbjct 76938 GACACTATTG-ACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCA 76880 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || |||||||| ||||||| | ||| || |||| || || Sbjct 76879 ACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 76820 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||| || || |||| |||||||||||||| |||| || Sbjct 76819 CATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 76772 >seq3 Length=600384 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 || ||||||||| ||||||||||| || ||||| |||||||| || | ||| ||||| Sbjct 21809 AAGAATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTC 21868 Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 ||||| ||| |||| || || || || || || ||||| |||| | Sbjct 21869 ATCTGACACCATTG-ACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAG 21927 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 |||| |||||| | || | ||| || |||||||| ||||||| | ||| || |||| | Sbjct 21928 ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACT 21987 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | ||||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 21988 ACAACATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343808196440