Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq37 288 1e-72 >seq37 Length=3023111 Score = 288 bits (318), Expect = 1e-72 Identities = 650/964 (67%), Gaps = 41/964 (4%) Strand=Plus/Minus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTC------ATAAC 92795 |||||||||| |||| | || ||| ||||| || | ||| | | || || || Sbjct 2627676 TTAGAAATCTTCATCAAATGCAAAATCATTGGCATCTTTATTTTCACTCTTGGCCATGAC 2627617 Query 92796 ACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGA 92855 |||| |||||||| || |||| |||||||||||||||| ||||| || |||| || Sbjct 2627616 ACCAGCCTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGA 2627557 Query 92856 TATCGAATTCACTAGTGATT-----GGATTCTTGGCGTTATAATACTTTTC----ACCGA 92906 || |||| | | | | ||||| || | || ||| |||||| ||| Sbjct 2627556 GAT---ATTCTCCATAAAATCAAATGGATTGGTGACATTGTAA-ACTTTTTTGTTACC-- 2627503 Query 92907 TCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAAT 92966 ||| | ||||||||| || || |||||||| | || ||| ||||||| | ||||| Sbjct 2627502 -CAAAGCAACCAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAAT 2627444 Query 92967 TCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026 ||||||| | | || || || | || || || ||||| ||||| || ||| |||| | Sbjct 2627443 TCATTCCCAACAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTG 2627384 Query 93027 CTTCTTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTA 93084 |||| | || | |||| | | || || ||| ||| | ||| | || | | Sbjct 2627383 CTTCAGT-AATAATTCTTTCAACAATCT-TTGGGTCAGGTCTATGTTGTAAATGAGCAAA 2627326 Query 93085 CATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAA 93144 || ||||| ||||| || || ||||||||||| || || | ||||| |||||| || Sbjct 2627325 CAACAAGCATGCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAA 2627266 Query 93145 TGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGa 93204 || || ||||| | | ||||| ||||| | ||| || || |||||||| ||| Sbjct 2627265 GGTCAATCCTGGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACT 2627206 Query 93205 aaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG---CGGA 93261 ||||| ||||| || || || ||||| || || | | || ||||| || |||| Sbjct 2627205 GAAAAAGATACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGA 2627146 Query 93262 ATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 || || || |||||| | | |||||||| || || || ||||| ||| | |||| Sbjct 2627145 AT--CT--TGAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTT 2627090 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 | ||||| || |||| | |||| || | | ||| || || || || || || | Sbjct 2627089 CAATAGCATTGAATAAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATA 2627030 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 ||||| |||| ||||| | || ||||| |||||||| || || || || | | Sbjct 2627029 ATGAATAAGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGG 2626970 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 |||| | || || ||||| |||||| | || || | |||||||| || ||||||| Sbjct 2626969 CTTCAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCAT 2626910 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTT--TATAAAATGTTTCTCATCATCTTTAAG 93558 | || || || ||||| |||| | || ||| || ||| | |||| || || | Sbjct 2626909 CAGAGGCAGCGAAAAAGGCCA--AGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAA 2626852 Query 93559 CTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 || || |||||| |||||||| | ||| | |||||| ||||||| || || Sbjct 2626851 TTTCTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGA 2626792 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 |||||| || || |||||||| | ||| || || || ||| ||| ||||| |||||| | Sbjct 2626791 TGCTTCAGCCTTCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATA 2626732 Query 93676 ACGA 93679 |||| Sbjct 2626731 ACGA 2626728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860542451880