Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 3e-38
seq22 168 1e-36
>seq3
Length=600384
Score = 174 bits (192), Expect = 3e-38
Identities = 167/214 (78%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || || ||||||||||| || ||||| | || || |||||
Sbjct 22025 CAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 21966
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || ||||| || |||||||||||
Sbjct 21965 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTC 21906
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||| || ||||| || ||||||||
Sbjct 21905 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGT 21846
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| ||||| ||||| ||||| || || ||||||
Sbjct 21845 TTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 21812
>seq22
Length=92557
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| ||||| |||||||| ||||| || ||||| | || || |||||
Sbjct 76786 CAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 76845
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || |||||||| ||||| |||||
Sbjct 76846 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 76905
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||||| || || ||||||| |||||| || || |||||||||||
Sbjct 76906 TTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGT 76965
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || |||||||| || |||||
Sbjct 76966 CTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 167 bits (184), Expect = 4e-36
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| |||||||| ||||| || ||||| | || || |||||
Sbjct 77014 CAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATC 77073
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || |||||||| ||||| |||||
Sbjct 77074 TTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTC 77133
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||||| ||| || || || |||||||||||
Sbjct 77134 TTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGT 77193
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || | || |||||||| || |||||| ||
Sbjct 77194 CTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTG 77230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621973749640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |