Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq37 145 9e-30 >seq37 Length=3023111 Score = 145 bits (160), Expect = 9e-30 Identities = 456/701 (65%), Gaps = 18/701 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | ||||||||||| || || |||||||||||||| ||||| | || || Sbjct 2501420 TAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAA 2501479 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || |||| | | | ||| | | ||| | || || ||| Sbjct 2501480 GCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCT 2501539 Query 114062 TTGAGGGCGTCCCAGTCGTAG--TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119 || | | ||||| || | || || ||| || | | ||||| || | || | Sbjct 2501540 TTCAATTCATCCCAATCCCACAATTCAG--TTGGCTTTCTGTTCCACAAGTCGTATTGCA 2501597 Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179 | |||||| || ||||| || || | | || || || || || || || |||| | Sbjct 2501598 ACAAACCTTGCGATGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCGCCGCTA 2501657 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 |||| || || | || || ||||| ||||| |||||||| || ||||| | Sbjct 2501658 ATTCAATTGATGCTTCAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATT 2501717 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 || | || || | ||||||||| ||| || | | |||||| |||| || | |||| Sbjct 2501718 CCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTT 2501777 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCACGGGA 114358 ||||||| | | ||||||| | |||||||| || || || || ||| || || Sbjct 2501778 GGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTC-AGCTTCAGGAACTGGG 2501836 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 || | || | ||| || || ||||| | ||| || ||||| || |||| ||||| Sbjct 2501837 TAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGC 2501896 Query 114419 AGCTTTTC---GT------AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 114469 | ||| || || || || | | | || ||| | | | | ||| | Sbjct 2501897 AACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGA---AGGTAAA 2501953 Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 || || || |||| ||||| |||| ||||| | | || || | |||||| Sbjct 2501954 GCAATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCA 2502013 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 |||||| || ||| ||||| ||||| || ||||| || ||||| |||||||| Sbjct 2502014 CAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAA 2502073 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 ||||||||||| | |||| |||| || || ||||| ||||| Sbjct 2502074 GCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTG 2502114 Score = 98.7 bits (108), Expect = 1e-15 Identities = 220/326 (67%), Gaps = 11/326 (3%) Strand=Plus/Plus Query 10872 TATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG 10931 ||||||| |||||||| ||| ||| |||||||| | || ||| | ||| ||||| | Sbjct 2807264 TATCAAACCCATCCATTTCAACCAATAGTTGATTCAATGTAGTTTCTCTTTCGTCATTAG 2807323 Query 10932 CGG-----GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAA 10986 | |||| | | | | | ||||||||| | ||| || ||||| || | || Sbjct 2807324 CTCCTGTTGCATTTCCCTTGGAT--CTTTGCTTACCAATGGCATCGATTTCGTCAACAAA 2807381 Query 10987 AACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACC 11046 || ||| | ||| |||||| | ||| | || | ||| || || | |||||| Sbjct 2807382 CACAATAGATGGTGCATTTTCCCTTGCAGTCTTGAATAAATCACGCACACGTGAGGCACC 2807441 Query 11047 GACACCCACAAACATTTCCACAAAATTGGCGGCGGA-ACATTGGAT-GAAGGGGACGTTG 11104 ||||| ||||||||||| || || | || |||| ||| | || || || ||| Sbjct 2807442 CACACCAACAAACATTTCAACGAATTCGGAACCGGATACA--GAATAAAACGGAACGCCA 2807499 Query 11105 GATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGA 11164 | ||| || || ||||| |||||| | ||||| || || || || ||||| ||| Sbjct 2807500 GCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTTACCTGTTCCCGGCGGCCCTGAAAGA 2807559 Query 11165 AGGGCACCACGTGGGATCCTGGCACC 11190 | |||||||| |||||| ||||||| Sbjct 2807560 ATAGCACCACGGGGGATCTTGGCACC 2807585 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||| || ||||| | || | |||||| || ||| || |||| Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | || | |||||||||||||||||| | | ||| || || ||| ||||| Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2627196 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 ||||| ||| || || |||| | | ||||||||| Sbjct 2627195 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAA 2627158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353323723960