Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq37 109 5e-19 seq22 96.9 3e-15 >seq37 Length=3023111 Score = 109 bits (120), Expect = 5e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 153999 AAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACA 154058 ||||||| | ||||| | |||| | |||||| || || ||||| || | | Sbjct 2501360 AAATCTTTCAACAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGAG 2501419 Query 154059 TACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTT 154118 || | ||| ||| | |||||||| |||| ||||| || || ||||| | ||||| Sbjct 2501420 TAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAA 2501479 Query 154119 GCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAAT 154178 || || ||||| ||||||||||| ||||||| || ||||||||| |||| | Sbjct 2501480 GCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTCT 2501539 Query 154179 TTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAA 154238 || || || |||||| |||||| | || || | |||||||| |||||||||||| Sbjct 2501540 TTCAATTCATCCCAATCCCACAATTCAGTTGGCTTTCTGTTCCACAAGTCGTATTGCAAC 2501599 Query 154239 ACACC 154243 | ||| Sbjct 2501600 AAACC 2501604 >seq22 Length=92557 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | || | || |||||||||||||||||||| || | Sbjct 76771 ACCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 76830 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | || || || ||| |||| | | || || || || || Sbjct 76831 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 76890 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || || ||| || | || || | || || Sbjct 76891 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAAC 76950 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || | |||||| |||||||| ||||| |||||||||||||| Sbjct 76951 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | || | || |||||||||||||||||||| || | Sbjct 76999 ACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGA 77058 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | || || || ||| |||| | | || || || || || Sbjct 77059 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 77118 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || || || || | || || | || || Sbjct 77119 AATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAAC 77178 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||| || | |||||| |||||||| ||||| ||||||||||||||| Sbjct 77179 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 77227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644568914280