Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq22 93.3 3e-14
seq3 87.8 1e-12
>seq22
Length=92557
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | || ||||| || || ||| ||||||||| || || || |||| |
Sbjct 76772 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 76831
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | |||| ||||||||||| || ||||||| || | || ||||| | ||
Sbjct 76832 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 76891
Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||||||||||| | || || | | || ||| || ||||||| ||| |
Sbjct 76892 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATA--GTGTCTGATGATTCAA 76949
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || || || || || ||||| || || ||||| ||||| || |||||
Sbjct 76950 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 76998
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | || ||||| ||||| ||| ||||||||| || || || |||| |
Sbjct 77000 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 77059
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | |||| ||||||||||| || ||||||| || | || ||||| | ||
Sbjct 77060 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 77119
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCAC 39671
| ||||||||||| || || ||| | ||| | | | ||||||| || ||
Sbjct 77120 ATACCTTCTTTGTCTTGGATCTTGGATTTGA-CGTTGTCAATAGTGTCTGATGACTCAAC 77178
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || || || ||||| || || ||||| ||||| || |||||
Sbjct 77179 CTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 77226
>seq3
Length=600384
Score = 87.8 bits (96), Expect = 1e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 42515 TTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGAAAA 42574
|||||||||||||||| ||||| ||||| ||||| || || || || ||| |||
Sbjct 74116 TTACCTAAATCACCAACATGTCTTTCTTGATCATCTGGCCCACCATGGGTCTTACTAAAT 74175
Query 42575 GGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATG 42630
|| || ||||| |||||| || || |||||||||||| | || |||||| ||||
Sbjct 74176 GGGTTGAAATGAGGACCAGCTGAGGTGCATCCATTGGTGTTGTCACCAAATGCATG 74231
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGT-GTTCTTTATG 42570
||||||||||||||||||| |||| ||| ||||| | || | |||| | |||| |
Sbjct 84600 ATGTTACCTAAATCACCAACGTGTCTTTCATCATCTTCTGGAGCACCGTGGGTCTTGCT- 84658
Query 42571 AAAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATG 42630
||| || || ||||| |||||| || ||||||||||||||| | || |||||| ||||
Sbjct 84659 AAATGGGTTGAAATGAGGACCAGCTGAGGTACATCCATTGGTGTTGTCACCAAATGCATG 84718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347369443358021
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |