Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq37 253 3e-62 seq2 87.8 2e-12 >seq37 Length=3023111 Score = 253 bits (280), Expect = 3e-62 Identities = 858/1319 (65%), Gaps = 33/1319 (3%) Strand=Plus/Minus Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 ||||| || ||||| |||| ||| |||||||| ||||||| | |||||| || || Sbjct 2502687 TTCAATGCCGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 2502628 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 ||||| || | || ||||| | |||| | | ||||||| || ||||| | ||| Sbjct 2502627 GATTCTATTGAAGGTATTTATGACACTTTAAAGACATGTGCCTTGATTTCAAAAAGTGCT 2502568 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGA-GGTAC 111907 |||||||| || |||| ||||| | | | ||| | || | | | ||||| Sbjct 2502567 GGTGGTATTGGATTGCATATCCACAACATTCGTTCCA-CTGGTGCCTACATCGCTGGTAC 2502509 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || ||| ||| ||||||||||||||||| |||| || || ||| ||| || || || Sbjct 2502508 CAACGGTACTTCAAATGGTATTATTCCAATGGTTCGTGTTTTCAACAACACTGCTCGTTA 2502449 Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATC------TATCGCAGTCTATCTTGAGCCATG 112021 ||| | |||| ||| | |||| || | | | || | |||||||| ||||| Sbjct 2502448 TGTGGATCAAGGTGG---TAACAAGAGACCAGGTGCTTTTGCTTTATATCTTGAACCATG 2502392 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| |||||| | || ||| |||| | | ||||| ||| | || || | Sbjct 2502391 GCACGCTGATATCTTTGACTTCATTGAAATTAGAAAGAACCATGGTAAGGAAGAAATTAG 2502332 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 | || | ||| | ||| | ||||| |||||| | || ||||| ||||||||| | Sbjct 2502331 AGCTAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTTATGAAAAGAGTTGAGCA 2502272 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| ||||| | | || | |||| | | || || | | ||| | || Sbjct 2502271 AAATGGTGATTGGACATTGTTCTCTCCAAATGAAGCTCCAAACTTGGCTGATACTTATGG 2502212 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||| || |||| | | || || |||||| ||||| |||| | | || | Sbjct 2502211 TGACGAATTTGTTGAGTTGTATGAGAAATACGAGAAAGAAGGTCGTGGTAGAAAAACAAT 2502152 Query 112262 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321 |||| | ||||| | | || | || | ||||| ||||||||||| |||| Sbjct 2502151 CAAAGCTCAAAAATTGTGGTATTCCATCTTGGAGGCACAAACTGAGACTGGTACCCCATT 2502092 Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381 ||| | ||||| || || |||||| ||| || ||||| ||||||||||| || || Sbjct 2502091 CATGTTGTACAAGGATGCTTGTAACACCAAGTCCAACCAAAAAAATTTGGGTGTTATTAA 2502032 Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441 ||||||| | ||| ||||| | |||| | | | |||||| ||||| || Sbjct 2502031 ATCTTCCAACTTGTGTTGTGAAATTGTTGAATATTCGGCACCAGATGAAGTTGCTGTTTG 2501972 Query 112442 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT--TTGAT 112499 |||| | || || || ||| | || | | | || | || ||| ||| ||| | Sbjct 2501971 TAACTTGGCTTCGATTGCTTTACCTTCTTTTATTGAGCAGGATGGTAAG-CATGCTTGGT 2501913 Query 112500 -----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 | ||| || | || || || || ||| ||| ||| || | || ||||| | Sbjct 2501912 ACAACTTTGACAAGTTGCATGACGTCACCAAAGTTGTTACACGTAATTTGAATAGAGTCA 2501853 Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 ||||| |||| | ||||| ||| ||| | ||| || ||||||||| | |||| Sbjct 2501852 TTGATCGAAACTACTACCCAGTTCCTGAAGCTGAGAGATCAAACATGAGACACAGACCAA 2501793 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT 112674 ||| | ||||||||||| | || |||| ||| || ||| | || |||||||| Sbjct 2501792 TTGCCTTGGGTGTCCAAGGCTTGGCTGATGCATTTATGGTTTTGAGAATCGGATTTGATT 2501733 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 || | ||||| | |||| | ||| | || ||||| ||||| ||||| || ||| ||| Sbjct 2501732 CCCAAGAAGCTAGGGAATTGAATATTCAAATTTTTGAAACAATCTATCATGCTGCTGTTG 2501673 Query 112735 AGGC--GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 | || | || || || || | || || ||||| |||||||| | | || || || Sbjct 2501672 AAGCATCAATT--GAATTAGCGGCGGAAGAAGGTCCCTATGAAACTTACCAAGGCTCACC 2501615 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA--CTAC 112850 ||| || ||||| || | |||| || ||||| | | || |||| || | | Sbjct 2501614 AGCATCGCAAGGTTTGTTGCAATACGACTTGTGGAACAGAAAG-CCAA-CTGAATTGTGG 2501557 Query 112851 GACTGGGACG-CTCTCAAGGAACGCAT-CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 || ||||| | | ||| || || | | | | | ||| | | ||| | ||| Sbjct 2501556 GATTGGGATGAATTGAAAGAAAAGCTTGCCA--AACACGGTATGAGAAACTCCTTGTTGG 2501499 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 |||| |||||||| || || || || ||||||| |||||||| |||||||| || || | Sbjct 2501498 TGGCTCCAATGCCTACTGCTTCTACATCACAAATTTTGGGTAACAATGAATGTTTCGAGC 2501439 Query 112969 CCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 | ||||| | || || || ||| |||||| | || || |||||| ||||| || Sbjct 2501438 CATACACTTCAAATATTTACTCT-AGAAGAGTGTTGGCTGGTGAGTTTCAAATTGTTAA 2501381 >seq2 Length=358706 Score = 87.8 bits (96), Expect = 2e-12 Identities = 265/405 (65%), Gaps = 6/405 (1%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| | |||||| | | | || | ||| | || ||| ||||| || |||| Sbjct 130522 ATCAAATCTACCTGGTCTCAATAATGCCTTATCCAAAATGTCAGGACGATTGGTACCGGC 130581 Query 15947 GATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 | ||||||| | || | || ||||||| || ||||| || ||| | || || Sbjct 130582 CAAAACAACAACA--TGATCAGTAGTATCAAACCCGTCCATTTCAACCAATAATTGATTC 130639 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064 | || | ||| || |||||||| | ||||| |||| || | || || || | Sbjct 130640 AAGGTGTTTTCACGCTCATCATTGCCACCCATACGACCATTACCTCTTTCTTTACCAATA 130699 Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 |||||||||||||||| || | ||| ||| | || | || || || | | Sbjct 130700 GCATCAATCTCATCAACAAAAATGATTGCTGGGGCCATATCCCTTGCCGTTTTGAATAAA 130759 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG-AACA 16183 || ||||||||| || || ||||||||||||||||| ||||| | | ||| |||| Sbjct 130760 TCACGTACACGCGATGCACCAACACCAACAAACATCTCAACAAATTCCGATCCGGAAACA 130819 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 | || || || ||| | |||||| ||| | ||| || | | |||||||| || Sbjct 130820 CT-GAGAAAAGGTACACCTGCTTCACCAGCAGTTGCTTTTGCCAACAAGGTCTTACCTGT 130878 Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||| || |||| | | ||||| || || |||||||| || Sbjct 130879 ACCAGGAGGCCCCGACAAAATTGCACCACGAGGGATCTTGGCACC 130923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742112906640