Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05]
37 sequences; 13,050,082 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq37 185 1e-41
seq16 113 5e-20
>seq37
Length=3023111
Score = 185 bits (204), Expect = 1e-41
Identities = 552/842 (66%), Gaps = 21/842 (2%)
Strand=Plus/Plus
Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391
||||| | |||||| ||||||||||||| ||||| |||||||| || || || ||
Sbjct 2501999 TATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTG 2502058
Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451
|| |||| ||| || |||||||| || | |||| ||||||||||||| || || |||| |
Sbjct 2502059 GACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCC 2502118
Query 110452 TTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511
| | |||| | ||| | | || || ||| || | ||||||| | |
Sbjct 2502119 TCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTTTTTCTACCACGACCTTCTTTC 2502178
Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA-AAGACCCTTCGC 110570
||||| || ||||| || ||||||| | || || ||||| ||| || |
Sbjct 2502179 TCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCAAGT---TTGGA 2502235
Query 110571 -CTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628
||| | ||| |||| | | ||||| ||| | |||||| || ||||| ||||
Sbjct 2502236 GCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCATAAACAAA 2502295
Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688
|| || ||||||| || | ||| | ||| | | | ||||| | ||| |||||
Sbjct 2502296 TCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTC 2502355
Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-- 110746
| | || | ||||| | |||||| | |||||||||||| ||||| | ||| |
Sbjct 2502356 TTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAA 2502415
Query 110747 -----TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801
||| || ||| || ||| || | ||||| || || ||| ||||| ||
Sbjct 2502416 GCACCTGG-TCTCTTGTTACCACCT---TGATCCACATAACGAGCAGTGTTGTTGAAAAC 2502471
Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861
| | ||| |||||||| |||| || ||| || ||||| || || | |
Sbjct 2502472 ACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGT 2502531
Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921
|| |||||||| ||||||||||| ||||||||||| || | || ||| |||||
Sbjct 2502532 GGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACA 2502591
Query 110922 -CTCTGT-GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979
||| | ||||| |||||||||| ||||| |||||| | || | |||| | ||
Sbjct 2502592 TGTCTTTAAAGTGT--CATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAA 2502649
Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039
||||| ||||| || || || || || |||||||| | || | ||||| |
Sbjct 2502650 CAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTA 2502709
Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099
|| | ||| |||||| ||||| || || | | || | |||| | || ||
Sbjct 2502710 AAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCATGG 2502769
Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACA 111159
|||||||| ||||||| ||| | || | ||| || |||| | ||||||| || |
Sbjct 2502770 ATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATA 2502829
Query 111160 CG 111161
||
Sbjct 2502830 CG 2502831
>seq16
Length=320745
Score = 113 bits (124), Expect = 5e-20
Identities = 130/173 (75%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 158479 TATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTA--TCAACGTTGGTG 158536
||||| |||||||||||||||||||| | ||||| || || ||| ||||| |||||
Sbjct 6566 TATGGTCGTGTGGCACCTCGTTCGGGGCTTGCTGTCAAACATGGTATTTCAAC--TGGTG 6509
Query 158537 CGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAG 158596
| || ||||| || |||||||| || ||||| ||||| || | ||||| ||| |
Sbjct 6508 CAGGTGTCATTGACGCTGATTATCGAGGTGAAGTTAAAGTTGTCTTGTTCAACCATTCTG 6449
Query 158597 ACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAA 158649
| ||| ||||||| ||||| ||||| ||| | || || || | ||| |||||
Sbjct 6448 AAAAGAACTTTGATGTTAAAAAGGGCGATAGAATTGCTCAATTGGTTTTAGAA 6396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975727598600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |