Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq37 210 3e-49 seq16 107 2e-18 >seq37 Length=3023111 Score = 210 bits (232), Expect = 3e-49 Identities = 928/1451 (64%), Gaps = 51/1451 (4%) Strand=Plus/Plus Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGG 105954 || ||||| |||||| || || | |||||| ||| || || || | ||||| || Sbjct 2501381 TTAACAATTTGAAACTCACCAGCCAACACTCTTCT-AGAGTAAATATTTGAAGTGTATGG 2501439 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || || |||||||| |||||||| ||||||| || || || || |||||||| |||| Sbjct 2501440 CTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCAC 2501499 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTG-ATGCGTTCCTTGAGAA-CATCCCAGTCG 106072 ||| | ||| | | ||| | || | | | || || ||| | ||||||| || Sbjct 2501500 CAACAAGGAGTTTCTCATACCGTGTT--TGGCAAGCTTTTCTTTCAATTCATCCCAATCC 2501557 Query 106073 TAG--TTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | || || | | |||| | ||||| || |||| | || ||||| || | | Sbjct 2501558 CACAATTCAGTTGGCTTTCTGTT--CCACAAGTCGTATTGCAACAAACCTTGCGATGCTG 2501615 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC---AATTCACAGCTCGCCT 106187 | || || | | || ||||||| ||||| |||| ||| |||||| || | Sbjct 2501616 GTGAGCCTTGGTAAGTTTCATAGGGACCTT---CTTCCGCCGCTAATTCAATTGATGCTT 2501672 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 | | | || ||||| || |||||||| || || ||||| ||| | ||||| | | Sbjct 2501673 CAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGG 2501732 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 |||||||| || | | | |||||| |||| || | ||||| |||||||| ||| Sbjct 2501733 AATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAA 2501792 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGT 106364 | |||||||||| ||| || || || | ||| ||| || || || | |||| | Sbjct 2501793 TTGGTCTGTGTCTCATGTTTGA---TCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGAT 2501849 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 ||||||||| || | ||| ||||||| || |||| ||||| | || ||| | | Sbjct 2501850 CAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGT 2501909 Query 106425 -----CAAAAGTGCG----AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 ||| ||| | || ||| | | | | || | || || || |||| Sbjct 2501910 TGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAA---GGTAAAGCAATCGAAGCCA 2501966 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || |||||||| ||||| | | || || | |||||| ||||||||||| Sbjct 2501967 AGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTTCACAACACAAGTTGG 2502026 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 || ||||| |||||||| |||||||| ||| |||| || ||||||||||| | Sbjct 2502027 AAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACA 2502086 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGG 106655 |||| | || || || ||||| || |||| || | || | | ||||| | | Sbjct 2502087 ACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAG 2502146 Query 106656 CTGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 || | | || || || | || || |||||| || || | | |||| Sbjct 2502147 CT--TTGATTGTTTTTCTACCACGACCTTCTTTCTCGTATTTCTCATACAACTCAACAAA 2502204 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 106773 || ||||| | || | | ||| || | | |||| |||| | | ||| | Sbjct 2502205 TTCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATC 2502264 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 |||| | |||||| | ||||| || | ||||| ||||||| | || || | || Sbjct 2502265 ACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTC 2502324 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 |||| | | ||||| | ||| ||||| || | |||| ||| || | |||||| Sbjct 2502325 TCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATC 2502384 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 106949 ||||||||||| |||||||| | || | || || || | | ||| |||||| Sbjct 2502385 AGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGAT 2502443 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 ||||| || || ||| ||| || || |||| ||||||||||||||||| ||| || Sbjct 2502444 CCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAATAATACCATTTGAAGTAC 2502503 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 | || || || || | | ||| | | | ||||| |||| ||||||| Sbjct 2502504 CGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTGGATATGCAATCCAATAC 2502563 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | ||||| | ||||| || ||||| | | | ||| |||| ||||| | || | Sbjct 2502564 CACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAG 2502623 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 107189 | || || || | || | | ||| ||| ||||| || ||| |||| ||||| |||| Sbjct 2502624 AATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCAT 2502683 Query 107190 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCA 107249 |||| | ||| | | ||| | || | ||| |||||| | ||| ||||| | Sbjct 2502684 TGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAA 2502743 Query 107250 AGAC----AGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTAT 107305 || | || || |||| || ||||| || || || || | ||||| || || | Sbjct 2502744 TAACTCTTGGGAT--ATCTCTT--CCATGGATACCAATAGCAACTCTCATAATCAAGTGT 2502799 Query 107306 TGGGGTGTTTC 107316 || ||| |||| Sbjct 2502800 TGTGGTCTTTC 2502810 Score = 114 bits (126), Expect = 2e-20 Identities = 350/531 (66%), Gaps = 29/531 (5%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||| ||||| || |||| | |||||| || ||| | ||| Sbjct 2627315 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2627256 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | || | |||||||||||| |||| | ||| || || || ||| ||||| Sbjct 2627255 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCA-AACGATCCACTGAAAAAGAT 2627197 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA----GGAGCGAGACTTTGTGT 117448 |||||| ||| ||||| |||| | | ||| || || | | || || | | | Sbjct 2627196 ACCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCG-GAATCT---T 2627141 Query 117449 CAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 117508 || |||| | || ||||| | |||||||| | ||| || | |||| || || | Sbjct 2627140 GAATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCAT 2627081 Query 117509 CAAATAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGA 117563 ||||| | ||||| || | |||||| || || | ||||||||| ||| Sbjct 2627080 TGAATAAGAAATCGGCTTCCTT-----TGGATCCTTGATATAAGTTTCAATCAATAATGA 2627026 Query 117564 ATATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTT 117622 ||| ||||| ||||| ||| ||| || | ||| | | || ||||| |||| Sbjct 2627025 ATAAGTTTCTGAATGAATGTTTTCCATCAT-GATTTGGAAACCATAAAATGATTTGGCTT 2626967 Query 117623 CGCTTATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 117682 | || || |||||| | | ||| || | | || ||| |||||| ||||| | Sbjct 2626966 CAGGAATTTGAACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAG 2626907 Query 117683 ACCCAGCAAAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCAGGGT 117740 | |||| || || |||| || | ||| ||||| | ||||||| ||||||| | Sbjct 2626906 AGGCAGCGAAAAAGGCCAAGA--TTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTT 2626849 Query 117741 CT---TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 || |||| || | ||||||||| ||||||| |||||| |||||||| Sbjct 2626848 CTCTCTCCAATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCA 2626798 Score = 89.7 bits (98), Expect = 6e-13 Identities = 218/326 (67%), Gaps = 11/326 (3%) Strand=Plus/Plus Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336 ||||||| |||||||| || ||| ||||| || | || ||| | ||| ||||| | Sbjct 2807264 TATCAAACCCATCCATTTCAACCAATAGTTGATTCAATGTAGTTTCTCTTTCGTCATTAG 2807323 Query 9337 CTG-----GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAA 9391 || |||| | | | | | |||||| || | |||||| || || |||| || Sbjct 2807324 CTCCTGTTGCATTTCCCTTGGAT--CTTTGCTTACCAATGGCATCGATTTCGTCAACAAA 2807381 Query 9392 GACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCC 9451 |||||| ||||| |||||| | || | | || | ||| || || | | ||| || Sbjct 2807382 CACAATAGATGGTGCATTTTCCCTTGCAGTCTTGAATAAATCACGCACACGTGAGGCACC 2807441 Query 9452 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT-GAAGGGGACATTA 9509 ||||||||||||||| || || || | | |||| ||| | || || || || | Sbjct 2807442 CACACCAACAAACATTTCAACGAATTCGGAACCGGATACA--GAATAAAACGGAACGCCA 2807499 Query 9510 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9569 | ||| || || ||||| |||||| | |||||||| || || ||| || | || Sbjct 2807500 GCTTCCCCAGCTGTGGCTTTGGCGAGCAATGTCTTACCTGTTCCCGGCGGCCCTGAAAGA 2807559 Query 9570 AGGGCACCCCGTGGAATCTTGGCGCC 9595 | ||||| || || |||||||| || Sbjct 2807560 ATAGCACCACGGGGGATCTTGGCACC 2807585 >seq16 Length=320745 Score = 107 bits (118), Expect = 2e-18 Identities = 187/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 155030 TGCCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTA 155089 |||| | |||| ||||||||||| ||||| || || || || ||||| || ||||||| Sbjct 6580 TGCCTATTGGTACATATGGTCGTGTGGCACCTCGTTCGGGGCTTGCTGTCAAACATGGTA 6521 Query 155090 TTCAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCT 155149 || | |||||| ||||| ||||| | || ||| ||||||||| ||||| || | | Sbjct 6520 TTTCAACTGGTGCAGGTGTCATTGACGCTGATTATCGAGGTGAAGTTAAAGTTGTCTTGT 6461 Query 155150 TCAATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCC 155209 |||| || || || ||||||| || || || || ||| | || || ||| | || Sbjct 6460 TCAACCATTCTGAAAAGAACTTTGATGTTAAAAAGGGCGATAGAATTGCTCAATTGGTTT 6401 Query 155210 TTGAGCGCTGTGAAACACCCGATGTGGAGGAAATT-----GGTGTTCTTGAAGAG-ACAG 155263 | || | || | | ||| | || |||||| || |||| ||| || | Sbjct 6400 TAGAAAGAATTGTTAATGCTGATATTGAAGAAATTACTGAGGAAGCATTGACGAGCACTG 6341 Query 155264 AGAGAGGTGCGGGTGGATTTGGATCTACTGG 155294 || |||||| |||||||||||||| || || Sbjct 6340 AGCGAGGTGAAGGTGGATTTGGATCCACAGG 6310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980527133880