Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq37 172 6e-38 >seq37 Length=3023111 Score = 172 bits (190), Expect = 6e-38 Identities = 214/293 (73%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 153733 GTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGAT 153792 |||||| || |||||| || |||||| | ||||| || ||| ||||| | |||| Sbjct 1509163 GTGAGTTTGGCGCTGATATCGCCTTAGGTACTTCACAAAGATTCGGTGTTCCTTTTGGAT 1509104 Query 153793 ATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTG 153852 |||| ||||| ||||||||||||||||| || | |||||||| ||||| ||||||| Sbjct 1509103 ATGGTGGTCCCCATGCTGCATTCTTTGCCACTTCCCACAAGTATGCCAGAAAAATACCTG 1509044 Query 153853 GCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTAC 153912 | |||||||| || ||| |||||| ||||| ||| | |||||||| | | Sbjct 1509043 GAAGAATTGTTGGGGTCTCAAAAGATAGATTGGGTAAACCAGCTTTGAGATTAGCTTTGC 1508984 Query 153913 AGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGG 153972 | |||||||| || ||||||| ||||| ||||| || || || ||||||||||| | Sbjct 1508983 AAACTAGAGAACAACATATCAAAAGAGAGAAAGCTACATCAAATATTTGCACAGCTCAAG 1508924 Query 153973 CACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGA 154025 | | ||||||| || || | | |||||| | |||||||| |||| ||| Sbjct 1508923 CTTTATTGGCTAACATTTCAGCAAACTATGCCGTTTATCATGGACCAGAAGGA 1508871 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264 |||| || |||| || ||| || ||| ||| ||||| || || ||||| || ||| Sbjct 1509706 TTATTGGAAAAGGTTATGCTGGTACGATTTTACCACCAGTGATTCAAAGAAAC-TTGTTG 1509648 Query 153265 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 | | | || |||||||| || || || || |||||| | ||||| ||||| || || Sbjct 1509647 GAACTGCCAGAGTGGTACACTTCGTATACCCCATATCAACCAGAGATTTCTCAAGGTCGA 1509588 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 ||| || ||| || || || ||||| | || ||| | ||||| || || ||| Sbjct 1509587 TTGCAAAGTTTGTTAAACTATCAAACCATGATTACATCCTTAACAGGTTTGGACATGGCA 1509528 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 |||||||| |||| ||||||| || || || || || |||||| Sbjct 1509527 AACGCATCATTATTGGATGAAGGTACCGCTGCTGCTGAGGCAATG 1509483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212532114080