Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982555.1_202014-03-05] 37 sequences; 13,050,082 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq37 163 3e-35 >seq37 Length=3023111 Score = 163 bits (180), Expect = 3e-35 Identities = 212/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 158408 GTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGAT 158467 |||||| || ||| || || |||||| | ||||| || ||| ||||| | |||| Sbjct 1509163 GTGAGTTTGGCGCTGATATCGCCTTAGGTACTTCACAAAGATTCGGTGTTCCTTTTGGAT 1509104 Query 158468 ACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTG 158527 | || ||||| ||||||||||||||||| || | |||||||| ||||| ||||||| Sbjct 1509103 ATGGTGGTCCCCATGCTGCATTCTTTGCCACTTCCCACAAGTATGCCAGAAAAATACCTG 1509044 Query 158528 GCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTAC 158587 | |||||||| || ||| |||||| ||||| ||| | |||||||| | | Sbjct 1509043 GAAGAATTGTTGGGGTCTCAAAAGATAGATTGGGTAAACCAGCTTTGAGATTAGCTTTGC 1508984 Query 158588 AGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAG 158647 | |||||||| || ||||||| |||||| ||||| || || || |||||||| |||| Sbjct 1508983 AAACTAGAGAACAACATATCAAAAGAGAGAAAGCTACATCAAATATTTGCACAGCTCAAG 1508924 Query 158648 CACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGA 158700 | | ||||||| || || | |||||| | |||||||| |||| ||| Sbjct 1508923 CTTTATTGGCTAACATTTCAGCAAACTATGCCGTTTATCATGGACCAGAAGGA 1508871 Score = 111 bits (122), Expect = 2e-19 Identities = 261/384 (68%), Gaps = 10/384 (3%) Strand=Plus/Minus Query 159383 AAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGA 159442 ||||||| | ||| | || |||| || || ||||| || || ||||||||||||| | Sbjct 1508176 AAAGAAACATTTGTCTTATTCCAGTCTCTGCTCATGGTACCAACCCTGCATCAGCAGCAA 1508117 Query 159443 TGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAG 159502 || || |||||||||| ||||| ||| || |||| || ||| | |||| Sbjct 1508116 TGTGCGGATTGAAAGTTGTTCCAGTCAAATGTTTAGACAATGGTTCTATTGACTTGAAAG 1508057 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACAT-TTG--AAC-TGTCATGTATTATGATTACA 159558 || | || |||||| || | || |||| || ||| ||| | || ||||| || Sbjct 1508056 AT-TTGA-AAGAAA--AAGCTGAAAAACATGCTGCTAACTTGTGTTCAATCATGATCACT 1508001 Query 159559 TATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCAT 159618 |||||||| || |||| | |||||| | | | | | | | | ||||||||| Sbjct 1508000 TATCCATCCACTTATGGATTGTTTGAACCGGGTGTAAAAGAAGCAATTGACATTGTTCAT 1507941 Query 159619 GAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCA 159678 |||||||||| ||||| | |||||||| || | |||||||| || ||| || || Sbjct 1507940 CAGAATGGTGGGTTAGTATACTTGGATGGTGCTAACATGAATGCACAAGTTGGTTTAACA 1507881 Query 159679 AAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738 || |||| | ||||| ||||| ||||| | || | |||||||| || || ||| Sbjct 1507880 TCCCCTGGTGATTTAGGTGCTGATGTTTGTCACTTGAATATCCATAAGAC-TTTTGCATT 1507822 Query 159739 -CCACATGGAGGTGGAGGTCCTGG 159761 ||||| ||||| || ||||| Sbjct 1507821 GAGTCATGGTGGTGGTGGACCTGG 1507798 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| || |||| || ||| || || ||| ||||| || || ||||| || ||| Sbjct 1509706 TTATTGGAAAAGGTTATGCTGGTACGATTTTACCACCAGTGATTCAAAGAAAC-TTGTTG 1509648 Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 | | | || |||||||| || || || || |||||| | ||||| ||||| || || Sbjct 1509647 GAACTGCCAGAGTGGTACACTTCGTATACCCCATATCAACCAGAGATTTCTCAAGGTCGA 1509588 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 ||| || ||| || || || ||||| | || ||| | ||||| | || ||| Sbjct 1509587 TTGCAAAGTTTGTTAAACTATCAAACCATGATTACATCCTTAACAGGTTTGGACATGGCA 1509528 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 |||||||| |||| ||||||| || || || || || |||||| Sbjct 1509527 AACGCATCATTATTGGATGAAGGTACCGCTGCTGCTGAGGCAATG 1509483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050928026320